HBV Target gene Detail Information

> FAM155A Gene Search Result


Gene Information
Gene Name FAM155A
Gene ID 728215
Gene Full Name family with sequence similarity 155 member A
Transcripts ENSG00000204442
Virus HBV
Gene Type protein coding
HPA Location Info Nucleoplasm;Vesicles;Centrosome;
Membrane Info Predicted membrane proteins
HPA Protein Class Info Predicted membrane proteins
Uniport_ID B1AL88
VEGA ID OTTHUMG00000017326
String ID 9606.ENSP00000365080
PharmGKB ID PA162386676
Target gene [FAM155A] related to VISs
DVID Chromosome HM TFBS CA Sum of Overlapped Records Detail
1003421 chr13 15 54 66 135 View
1007136 chr13 21 9 30 View
1010121 chr13 12 1 13 View
1012830 chr13 4 2 6 View

Relationship between gene expression and immune infiltrating cell level
Data ID Disease Sample number Sample type
LIHC (TCGA) Liver hepatocellular carcinoma 424 Liver hepatocellular carcinoma HCV (HBV+)(86), Liver hepatocellular carcinoma HCV (HBV-)(19), Liver hepatocellular carcinoma (HBV+)(209), Liver hepatocellular carcinoma (HBV+)(60), Paracancerous HCV (HBV+)(4), Paracancerous (HBV-)(28), Paracancerous (HBV+)(18)

> Dataset: LIHC

HeatMap of cell type fractions in all samples Lollipop of FAM155A expression and immune infiltrating cell level correlation result in HBV+ samples
FAM155A expression: Low -> High

Contents
Description

Gene Information Note

  • Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in the "Target gene [gene] related to VIS" section

Immune Analysis Plot Note

  • Left: Heatmap of target gene expression and the level of various types of immune cells (cell type fractions) in all samples based on CIBERSORT method.
  • Right: Correlation of target gene expression and the level of various types of immune cells in virus positive samples (Pearson Correlation Coefficient).