HBV Target gene Detail Information

> FAM138F Gene Search Result

Gene Information

Gene Name	FAM138F
Gene ID	641702
Gene Full Name	family with sequence similarity 138 member F
Gene Alias	F379
Transcripts	ENSG00000282591
Virus	HBV
Gene Type	ncRNA
HPA Location Info
HGNC ID	HGNC:33581
VEGA ID	OTTHUMG00000180467
lncRNASNP2 ID	NONHSAG024270.2
PharmGKB ID	PA164719540

Target gene [FAM138F] related to VISs

DVID	Chromosome	HM	TFBS	CA	Sum of Overlapped Records	Detail
1401424	chr19				0	View
1401425	chr1				0	View
1402223	chr1	31	6		37	View
1402224	chr19	145	52	33	230	View

Relationship between gene expression and immune infiltrating cell level

Data ID	Disease	Sample number	Sample type
LIHC (TCGA)	Liver hepatocellular carcinoma	424	Liver hepatocellular carcinoma HCV (HBV+)(86), Liver hepatocellular carcinoma HCV (HBV-)(19), Liver hepatocellular carcinoma (HBV+)(209), Liver hepatocellular carcinoma (HBV+)(60), Paracancerous HCV (HBV+)(4), Paracancerous (HBV-)(28), Paracancerous (HBV+)(18)

> Dataset: LIHC
HeatMap of cell type fractions in all samples	Lollipop of FAM138F expression and immune infiltrating cell level correlation result in HBV+ samples
FAM138F expression: Low -> High

Contents
Description

Gene Information Note

Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in the "Target gene [gene] related to VIS" section

Immune Analysis Plot Note

Left: Heatmap of target gene expression and the level of various types of immune cells (cell type fractions) in all samples based on CIBERSORT method.
Right: Correlation of target gene expression and the level of various types of immune cells in virus positive samples (Pearson Correlation Coefficient).