HIV Target gene Detail Information

> FAM120A Gene Search Result

Gene Information

Gene Name	FAM120A
Gene ID	23196
Gene Full Name	family with sequence similarity 120A
Gene Alias	OSSA; C9orf10; HBVPTPAP
Transcripts	ENSG00000048828
Virus	HIV
Gene Type	protein coding
HPA Location Info	Cytosol;
HPA Protein Class Info	Plasma proteins, Predicted intracellular proteins
Uniport_ID	Q9NZB2
HGNC ID	HGNC:13247
VEGA ID	OTTHUMG00000020252
OMIM ID	612265
String ID	9606.ENSP00000277165
PharmGKB ID	PA134954136

Target gene [FAM120A] related to VISs

DVID	Chromosome	HM	TFBS	CA	Sum of Overlapped Records	Detail
4004177	chr9	43	1	4	48	View
4010615	chr9	8			8	View
4012007	chr9	2	4		6	View

Relationship between gene expression and immune infiltrating cell level

Data ID	Disease	Sample number	Sample type
GSE17372 (GEO)	AIDS-associated lymphoma	17	AIDS-Related Lymphomas (HIV+)(17)
GSE50834 (GEO)	HIV-infected disease	44	HIV infected (23), HIV/TB co-infected (21)

> Dataset: GSE17372
HeatMap of cell type fractions in all samples	Lollipop of FAM120A expression and immune infiltrating cell level correlation result in HIV+ samples
FAM120A expression: Low -> High

> Dataset: GSE50834
HeatMap of cell type fractions in all samples	Lollipop of FAM120A expression and immune infiltrating cell level correlation result in HIV+ samples
FAM120A expression: Low -> High

Contents
Description

Gene Information Note

Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in the "Target gene [gene] related to VIS" section

Immune Analysis Plot Note

Left: Heatmap of target gene expression and the level of various types of immune cells (cell type fractions) in all samples based on CIBERSORT method.
Right: Correlation of target gene expression and the level of various types of immune cells in virus positive samples (Pearson Correlation Coefficient).