HIV Target gene Detail Information

> FAF1 Gene Search Result

Gene Information

Gene Name	FAF1
Gene ID	11124
Gene Full Name	Fas associated factor 1
Gene Alias	hFAF1; CGI-03; HFAF1s; UBXD12; UBXN3A
Transcripts	ENSG00000185104
Virus	HIV
Gene Type	protein coding
HPA Location Info	Nucleoplasm;
HPA Protein Class Info	Cancer-related genes, Plasma proteins, Predicted intracellular proteins
Uniport_ID	Q9UNN5
HGNC ID	HGNC:3578
VEGA ID	OTTHUMG00000007930
OMIM ID	604460
String ID	9606.ENSP00000379457
PharmGKB ID	PA27976

Target gene [FAF1] related to VISs

DVID	Chromosome	HM	TFBS	CA	Sum of Overlapped Records	Detail
4005090	chr1	31	4	1	36	View
4011156	chr1	7			7	View
4012668	chr1	4			4	View
4014838	chr1		2		2	View
4015200	chr1	1			1	View
4016473	chr1				0	View

Relationship between gene expression and immune infiltrating cell level

Data ID	Disease	Sample number	Sample type
GSE17372 (GEO)	AIDS-associated lymphoma	17	AIDS-Related Lymphomas (HIV+)(17)
GSE50834 (GEO)	HIV-infected disease	44	HIV infected (23), HIV/TB co-infected (21)

> Dataset: GSE17372
HeatMap of cell type fractions in all samples	Lollipop of FAF1 expression and immune infiltrating cell level correlation result in HIV+ samples
FAF1 expression: Low -> High

> Dataset: GSE50834
HeatMap of cell type fractions in all samples	Lollipop of FAF1 expression and immune infiltrating cell level correlation result in HIV+ samples
FAF1 expression: Low -> High

Contents
Description

Gene Information Note

Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in the "Target gene [gene] related to VIS" section

Immune Analysis Plot Note

Left: Heatmap of target gene expression and the level of various types of immune cells (cell type fractions) in all samples based on CIBERSORT method.
Right: Correlation of target gene expression and the level of various types of immune cells in virus positive samples (Pearson Correlation Coefficient).