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HPV Target gene Detail Information

> F9 Gene Search Result


Gene Information
Gene Name F9
Gene ID 2158
Gene Full Name coagulation factor IX
Gene Alias FIX; P19; PTC; HEMB; THPH8; F9 p22
Transcripts ENSG00000101981
Virus HPV
Gene Type protein coding
HPA Location Info
HPA Protein Class Info Candidate cardiovascular disease genes, Disease related genes, Enzymes, FDA approved drug targets, Plasma proteins, Predicted secreted proteins
Uniport_ID P00740
HGNC ID HGNC:3551
VEGA ID OTTHUMG00000022536
OMIM ID 300746
String ID 9606.ENSP00000218099
Drugbank ID BE0000364
PharmGKB ID PA27954
Target gene [F9] related to VISs
DVID Chromosome HM TFBS CA Sum of Overlapped Records Detail
5000218 chr1 471 84 4 559 View
5000988 chrX 32 10 17 59 View
5200169 chr9 14 98 4 116 View
5200328 chrX 4 4 View
5401211 chr1 0 View
5402784 chr1 0 View
5403685 chr13 13 14 11 38 View
5403871 chrX 3 3 View
5404602 chr9 1 1 2 View
5404812 chr12 12 4 1 17 View

Relationship between gene expression and immune infiltrating cell level
Data ID Disease Sample number Sample type
GSE140662 (GEO) Condyloma Acuminatum 8 Condyloma acuminata (HPV+)(5), Skin(3)
GSE65858 (GEO) Head and neck squamous cell carcinoma 270 Head and neck squamous cell carcinoma (EBV+)(73), Head and neck squamous cell carcinoma (EBV-)(197)
GSE55546 (GEO) Oropharyngeal squamous cell carcinoma 16 Oropharyngeal cancers (HPV+)(12), Normal (4)
GSE55544 (GEO) Oropharyngeal squamous cell carcinoma 23 Oropharyngeal cancers HPV Active (11), Oropharyngeal cancers HPV Inactive (4), Oropharyngeal cancers HPV Negative (8)
GSE55542 (GEO) Oropharyngeal squamous cell carcinoma 36 Oropharyngeal cancers HPV Active (12), Oropharyngeal cancers HPV Inactive (8), Oropharyngeal cancers HPV Negative (16)
GSE51993 (GEO) Cervical intraepithelial neoplasia 24 Cervical intraepithelial neoplasia (HPV+)(17), Normal(7)
HNSC (TCGA) Head and Neck squamous cell carcinoma 566 Head and Neck squamous cell carcinoma(HPV-)(483),Head and Neck squamous cell carcinoma(HPV+)(39),Paracancerous(HPV-)(44)

> Dataset: GSE140662

HeatMap of cell type fractions in all samples Lollipop of F9 expression and immune infiltrating cell level correlation result in HPV+ samples
F9 expression: Low -> High

> Dataset: GSE65858

HeatMap of cell type fractions in all samples Lollipop of F9 expression and immune infiltrating cell level correlation result in HPV+ samples
F9 expression: Low -> High

> Dataset: GSE55546

HeatMap of cell type fractions in all samples Lollipop of F9 expression and immune infiltrating cell level correlation result in HPV+ samples
F9 expression: Low -> High

> Dataset: GSE55544

HeatMap of cell type fractions in all samples Lollipop of F9 expression and immune infiltrating cell level correlation result in HPV+ samples
F9 expression: Low -> High

> Dataset: GSE55542

HeatMap of cell type fractions in all samples Lollipop of F9 expression and immune infiltrating cell level correlation result in HPV+ samples
F9 expression: Low -> High

> Dataset: GSE51993

HeatMap of cell type fractions in all samples Lollipop of F9 expression and immune infiltrating cell level correlation result in HPV+ samples
F9 expression: Low -> High

> Dataset: HNSC

HeatMap of cell type fractions in all samples Lollipop of F9 expression and immune infiltrating cell level correlation result in HPV+ samples
F9 expression: Low -> High
Contents
Description

Gene Information Note

  • Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in the "Target gene [gene] related to VIS" section

Immune Analysis Plot Note

  • Left: Heatmap of target gene expression and the level of various types of immune cells (cell type fractions) in all samples based on CIBERSORT method.
  • Right: Correlation of target gene expression and the level of various types of immune cells in virus positive samples (Pearson Correlation Coefficient).