HBV Target gene Detail Information

> F13B Gene Search Result


Gene Information
Gene Name F13B
Gene ID 2165
Gene Full Name coagulation factor XIII B chain
Gene Alias FXIIIB
Transcripts ENSG00000143278
Virus HBV
Gene Type protein coding
HPA Location Info
HPA Protein Class Info Cancer-related genes, Candidate cardiovascular disease genes, Disease related genes, Plasma proteins, Predicted secreted proteins
Uniport_ID P05160
HGNC ID HGNC:3534
VEGA ID OTTHUMG00000036519
OMIM ID 134580
String ID 9606.ENSP00000356382
Drugbank ID BE0009000
PharmGKB ID PA27944
Target gene [F13B] related to VISs
DVID Chromosome HM TFBS CA Sum of Overlapped Records Detail
1002660 chr17 39 125 64 228 View
1400049 chr1 22 1 23 View

Relationship between gene expression and immune infiltrating cell level
Data ID Disease Sample number Sample type
LIHC (TCGA) Liver hepatocellular carcinoma 424 Liver hepatocellular carcinoma HCV (HBV+)(86), Liver hepatocellular carcinoma HCV (HBV-)(19), Liver hepatocellular carcinoma (HBV+)(209), Liver hepatocellular carcinoma (HBV+)(60), Paracancerous HCV (HBV+)(4), Paracancerous (HBV-)(28), Paracancerous (HBV+)(18)

> Dataset: LIHC

HeatMap of cell type fractions in all samples Lollipop of F13B expression and immune infiltrating cell level correlation result in HBV+ samples
F13B expression: Low -> High

Contents
Description

Gene Information Note

  • Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in the "Target gene [gene] related to VIS" section

Immune Analysis Plot Note

  • Left: Heatmap of target gene expression and the level of various types of immune cells (cell type fractions) in all samples based on CIBERSORT method.
  • Right: Correlation of target gene expression and the level of various types of immune cells in virus positive samples (Pearson Correlation Coefficient).