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HBV Target gene Detail Information

> F11R Gene Search Result


Gene Information
Gene Name F11R
Gene ID 50848
Gene Full Name F11 receptor
Gene Alias JAM; KAT; JAM1; JAMA; JCAM; CD321; PAM-1
Transcripts ENSG00000158769
Virus HBV
Gene Type protein coding
HPA Location Info Microtubules;Cell Junctions;
Membrane Info Predicted membrane proteins
HPA Protein Class Info CD markers, Plasma proteins, Predicted membrane proteins
Uniport_ID Q9Y624
HGNC ID HGNC:14685
VEGA ID OTTHUMG00000028602
OMIM ID 605721
String ID 9606.ENSP00000357005
PharmGKB ID PA29991
Target gene [F11R] related to VISs
DVID Chromosome HM TFBS CA Sum of Overlapped Records Detail
1000924 chr1 105 886 280 1271 View

Relationship between gene expression and immune infiltrating cell level
Data ID Disease Sample number Sample type
GSE114783 (GEO) Chronic HBV (CHB) infection 36 Chronic hepatitis B patients (HBV+)(10),Hepatocellular carcinoma (HBV+)(10),Liver cirrhosis(HBV+)(10),Normal(3),HBV carriers (3)
GSE114783 (GEO) Hepatocellular carcinoma 36 Chronic hepatitis B patients (HBV+)(10),Hepatocellular carcinoma (HBV+)(10),Liver cirrhosis(HBV+)(10),Normal(3),HBV carriers (3)
GSE114783 (GEO) Liver cirrhosis 36 Chronic hepatitis B patients (HBV+)(10),Hepatocellular carcinoma (HBV+)(10),Liver cirrhosis(HBV+)(10),Normal(3),HBV carriers (3)
LIHC (TCGA) Liver hepatocellular carcinoma 424 Liver hepatocellular carcinoma HCV (HBV+)(86), Liver hepatocellular carcinoma HCV (HBV-)(19), Liver hepatocellular carcinoma (HBV+)(209), Liver hepatocellular carcinoma (HBV+)(60), Paracancerous HCV (HBV+)(4), Paracancerous (HBV-)(28), Paracancerous (HBV+)(18)

> Dataset: GSE114783

HeatMap of cell type fractions in all samples Lollipop of F11R expression and immune infiltrating cell level correlation result in HBV+ Chronic HBV (CHB) infection samples
F11R expression: Low -> High
Lollipop of F11R expression and immune infiltrating cell level correlation result in HBV+ Liver cirrhosis samples Lollipop of F11R expression and immune infiltrating cell level correlation result in HBV+ Hepatocellular carcinoma samples

> Dataset: LIHC

HeatMap of cell type fractions in all samples Lollipop of F11R expression and immune infiltrating cell level correlation result in HBV+ samples
F11R expression: Low -> High
Contents
Description

Gene Information Note

  • Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in the "Target gene [gene] related to VIS" section

Immune Analysis Plot Note

  • Left: Heatmap of target gene expression and the level of various types of immune cells (cell type fractions) in all samples based on CIBERSORT method.
  • Right: Correlation of target gene expression and the level of various types of immune cells in virus positive samples (Pearson Correlation Coefficient).