HBV Target gene Detail Information

> ERN2 Gene Search Result


Gene Information
Gene Name ERN2
Gene ID 10595
Gene Full Name endoplasmic reticulum to nucleus signaling 2
Gene Alias IRE1b; IRE2p; hIRE2p; IRE1-BETA
Transcripts ENSG00000134398
Virus HBV
Gene Type protein coding
HPA Location Info
Membrane Info Predicted membrane proteins
HPA Protein Class Info Enzymes, Predicted intracellular proteins, Predicted membrane proteins
Uniport_ID Q76MJ5
HGNC ID HGNC:16942
VEGA ID OTTHUMG00000177020
OMIM ID 604034
String ID 9606.ENSP00000256797
PharmGKB ID PA134889542
Target gene [ERN2] related to VISs
DVID Chromosome HM TFBS CA Sum of Overlapped Records Detail
1009219 chr16 9 6 2 17 View

Relationship between gene expression and immune infiltrating cell level
Data ID Disease Sample number Sample type
LIHC (TCGA) Liver hepatocellular carcinoma 424 Liver hepatocellular carcinoma HCV (HBV+)(86), Liver hepatocellular carcinoma HCV (HBV-)(19), Liver hepatocellular carcinoma (HBV+)(209), Liver hepatocellular carcinoma (HBV+)(60), Paracancerous HCV (HBV+)(4), Paracancerous (HBV-)(28), Paracancerous (HBV+)(18)

> Dataset: LIHC

HeatMap of cell type fractions in all samples Lollipop of ERN2 expression and immune infiltrating cell level correlation result in HBV+ samples
ERN2 expression: Low -> High

Contents
Description

Gene Information Note

  • Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in the "Target gene [gene] related to VIS" section

Immune Analysis Plot Note

  • Left: Heatmap of target gene expression and the level of various types of immune cells (cell type fractions) in all samples based on CIBERSORT method.
  • Right: Correlation of target gene expression and the level of various types of immune cells in virus positive samples (Pearson Correlation Coefficient).