HIV Target gene Detail Information

> EPG5 Gene Search Result


Gene Information
Gene Name EPG5
Gene ID 57724
Gene Full Name ectopic P-granules autophagy protein 5 homolog
Gene Alias HEEW1; VICIS; KIAA1632
Transcripts ENSG00000152223
Virus HIV
Gene Type protein coding
HPA Location Info Nuclear speckles;
HPA Protein Class Info Disease related genes, Predicted intracellular proteins
Uniport_ID Q9HCE0
HGNC ID HGNC:29331
VEGA ID OTTHUMG00000132626
OMIM ID 615068
String ID 9606.ENSP00000282041
PharmGKB ID PA134941500
Target gene [EPG5] related to VISs
DVID Chromosome HM TFBS CA Sum of Overlapped Records Detail
4009547 chr18 10 1 11 View
4013879 chr18 1 2 3 View
4016503 chr18 0 View

Relationship between gene expression and immune infiltrating cell level
Data ID Disease Sample number Sample type
GSE17372 (GEO) AIDS-associated lymphoma 17 AIDS-Related Lymphomas (HIV+)(17)

> Dataset: GSE17372

HeatMap of cell type fractions in all samples Lollipop of EPG5 expression and immune infiltrating cell level correlation result in HIV+ samples
EPG5 expression: Low -> High

Contents
Description

Gene Information Note

  • Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in the "Target gene [gene] related to VIS" section

Immune Analysis Plot Note

  • Left: Heatmap of target gene expression and the level of various types of immune cells (cell type fractions) in all samples based on CIBERSORT method.
  • Right: Correlation of target gene expression and the level of various types of immune cells in virus positive samples (Pearson Correlation Coefficient).