HTLV1 Target gene Detail Information

> EN1 Gene Search Result


Gene Information
Gene Name EN1
Gene ID 2019
Gene Full Name engrailed homeobox 1
Transcripts ENSG00000163064
Virus HTLV1
Gene Type protein coding
HPA Location Info Nucleoli rim;Nucleoplasm;
HPA Protein Class Info Predicted intracellular proteins, Transcription factors
Uniport_ID Q05925
HGNC ID HGNC:3342
VEGA ID OTTHUMG00000131401
OMIM ID 131290
String ID 9606.ENSP00000295206
PharmGKB ID PA27779
Target gene [EN1] related to VISs
DVID Chromosome HM TFBS CA Sum of Overlapped Records Detail
6001854 chr22 27 114 191 332 View
6003750 chr2 142 1 143 View
6004802 chr14 71 4 29 104 View
6004897 chr11 100 1 101 View
6005548 chr11 85 85 View
6010260 chr2 25 7 32 View

Relationship between gene expression and immune infiltrating cell level
Data ID Disease Sample number Sample type
GSE55851 (GEO) Adult T-cell leukemia 21 Normal (3), Asymptomatic carriers (HTLV1+)(6), Adult T-cell Leukemia-lymphoma (HTLV1+)(12)
GSE29312 (GEO) HTLV-1 associated myelopathy 39 Normal (9), Asymptomatic carriers (HTLV1+)(20), HTLV-1-associated myelopathy (HTLV1+)(10)
GSE29332 (GEO) HTLV-1 associated myelopathy 35 Normal (8), Asymptomatic carriers (HTLV1+)(17), HTLV-1-associated myelopathy (HTLV1+)(10)

> Dataset: GSE55851

HeatMap of cell type fractions in all samples Lollipop of EN1 expression and immune infiltrating cell level correlation result in HTLV1+ samples
EN1 expression: Low -> High

> Dataset: GSE29312

HeatMap of cell type fractions in all samples Lollipop of EN1 expression and immune infiltrating cell level correlation result in HTLV1+ samples
EN1 expression: Low -> High

> Dataset: GSE29332

HeatMap of cell type fractions in all samples Lollipop of EN1 expression and immune infiltrating cell level correlation result in HTLV1+ samples
EN1 expression: Low -> High

Contents
Description

Gene Information Note

  • Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in the "Target gene [gene] related to VIS" section

Immune Analysis Plot Note

  • Left: Heatmap of target gene expression and the level of various types of immune cells (cell type fractions) in all samples based on CIBERSORT method.
  • Right: Correlation of target gene expression and the level of various types of immune cells in virus positive samples (Pearson Correlation Coefficient).