HIV Target gene Detail Information

> EMB Gene Search Result

Gene Information

Gene Name	EMB
Gene ID	133418
Gene Full Name	embigin
Gene Alias	GP70
Transcripts	ENSG00000170571
Virus	HIV
Gene Type	protein coding
HPA Location Info
Membrane Info	Predicted membrane proteins
HPA Protein Class Info	Predicted membrane proteins, Transporters
Uniport_ID	Q6PCB8
HGNC ID	HGNC:30465
VEGA ID	OTTHUMG00000131161
OMIM ID	615669
String ID	9606.ENSP00000302289
PharmGKB ID	PA134917460

Target gene [EMB] related to VISs

DVID	Chromosome	HM	TFBS	CA	Sum of Overlapped Records	Detail
4000487	chr5	134	114	182	430	View

Relationship between gene expression and immune infiltrating cell level

Data ID	Disease	Sample number	Sample type
GSE17372 (GEO)	AIDS-associated lymphoma	17	AIDS-Related Lymphomas (HIV+)(17)
GSE50834 (GEO)	HIV-infected disease	44	HIV infected (23), HIV/TB co-infected (21)

> Dataset: GSE17372
HeatMap of cell type fractions in all samples	Lollipop of EMB expression and immune infiltrating cell level correlation result in HIV+ samples
EMB expression: Low -> High

> Dataset: GSE50834
HeatMap of cell type fractions in all samples	Lollipop of EMB expression and immune infiltrating cell level correlation result in HIV+ samples
EMB expression: Low -> High

Contents
Description

Gene Information Note

Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in the "Target gene [gene] related to VIS" section

Immune Analysis Plot Note

Left: Heatmap of target gene expression and the level of various types of immune cells (cell type fractions) in all samples based on CIBERSORT method.
Right: Correlation of target gene expression and the level of various types of immune cells in virus positive samples (Pearson Correlation Coefficient).