HBV Target gene Detail Information

> ELP2 Gene Search Result


Gene Information
Gene Name ELP2
Gene ID 55250
Gene Full Name elongator acetyltransferase complex subunit 2
Gene Alias StIP; MRT58; SHINC-2; STATIP1
Transcripts ENSG00000134759
Virus HBV
Gene Type protein coding
HPA Location Info Cytosol;Nucleoplasm;
HPA Protein Class Info Disease related genes, Predicted intracellular proteins
Uniport_ID Q6IA86
HGNC ID HGNC:18248
VEGA ID OTTHUMG00000132589
OMIM ID 616054
String ID 9606.ENSP00000414851
PharmGKB ID PA162385051
Target gene [ELP2] related to VISs
DVID Chromosome HM TFBS CA Sum of Overlapped Records Detail
1005939 chr18 35 10 45 View
1401918 chr18 35 10 45 View

Relationship between gene expression and immune infiltrating cell level
Data ID Disease Sample number Sample type
LIHC (TCGA) Liver hepatocellular carcinoma 424 Liver hepatocellular carcinoma HCV (HBV+)(86), Liver hepatocellular carcinoma HCV (HBV-)(19), Liver hepatocellular carcinoma (HBV+)(209), Liver hepatocellular carcinoma (HBV+)(60), Paracancerous HCV (HBV+)(4), Paracancerous (HBV-)(28), Paracancerous (HBV+)(18)

> Dataset: LIHC

HeatMap of cell type fractions in all samples Lollipop of ELP2 expression and immune infiltrating cell level correlation result in HBV+ samples
ELP2 expression: Low -> High

Contents
Description

Gene Information Note

  • Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in the "Target gene [gene] related to VIS" section

Immune Analysis Plot Note

  • Left: Heatmap of target gene expression and the level of various types of immune cells (cell type fractions) in all samples based on CIBERSORT method.
  • Right: Correlation of target gene expression and the level of various types of immune cells in virus positive samples (Pearson Correlation Coefficient).