HIV Target gene Detail Information

> ELF1 Gene Search Result

Gene Information

Gene Name	ELF1
Gene ID	1997
Gene Full Name	E74 like ETS transcription factor 1
Gene Alias	RIA1; EFTUD1
Transcripts	ENSG00000120690
Virus	HIV
Gene Type	protein coding
HPA Location Info	Nucleoplasm;
HPA Protein Class Info	Predicted intracellular proteins, Transcription factors
Uniport_ID	P32519
HGNC ID	HGNC:3316
VEGA ID	OTTHUMG00000016783
OMIM ID	189973
String ID	9606.ENSP00000239882
PharmGKB ID	PA27744

Target gene [ELF1] related to VISs

DVID	Chromosome	HM	TFBS	CA	Sum of Overlapped Records	Detail
4000532	chr13	347	12	34	393	View
4003734	chr13	42	13		55	View
4004084	chr11	10	4	35	49	View
4004434	chr13	40	4		44	View
4004796	chr13	9	10	20	39	View
4004815	chr13	32	7		39	View
4006261	chr11	6	19	1	26	View
4007895	chr11	10	7		17	View
4008324	chr11	7	5	3	15	View
4008479	chr13	3	12		15	View
4012388	chr11	3	2		5	View
4012709	chr13	2	2		4	View
4013356	chr13	3			3	View
4015028	chr13	1			1	View
4016205	chr13				0	View

Relationship between gene expression and immune infiltrating cell level

Data ID	Disease	Sample number	Sample type
GSE17372 (GEO)	AIDS-associated lymphoma	17	AIDS-Related Lymphomas (HIV+)(17)
GSE50834 (GEO)	HIV-infected disease	44	HIV infected (23), HIV/TB co-infected (21)

> Dataset: GSE17372
HeatMap of cell type fractions in all samples	Lollipop of ELF1 expression and immune infiltrating cell level correlation result in HIV+ samples
ELF1 expression: Low -> High

> Dataset: GSE50834
HeatMap of cell type fractions in all samples	Lollipop of ELF1 expression and immune infiltrating cell level correlation result in HIV+ samples
ELF1 expression: Low -> High

Contents
Description

Gene Information Note

Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in the "Target gene [gene] related to VIS" section

Immune Analysis Plot Note

Left: Heatmap of target gene expression and the level of various types of immune cells (cell type fractions) in all samples based on CIBERSORT method.
Right: Correlation of target gene expression and the level of various types of immune cells in virus positive samples (Pearson Correlation Coefficient).