HBV Target gene Detail Information

> ELAVL3 Gene Search Result


Gene Information
Gene Name ELAVL3
Gene ID 1995
Gene Full Name ELAV like RNA binding protein 3
Gene Alias HUC; HUCL; PLE21
Transcripts ENSG00000196361
Virus HBV
Gene Type protein coding
HPA Location Info
HPA Protein Class Info Predicted intracellular proteins
Uniport_ID Q14576
HGNC ID HGNC:3314
VEGA ID OTTHUMG00000182030
OMIM ID 603458
String ID 9606.ENSP00000352162
PharmGKB ID PA27742
Target gene [ELAVL3] related to VISs
DVID Chromosome HM TFBS CA Sum of Overlapped Records Detail
1002288 chr19 275 18 7 300 View

Relationship between gene expression and immune infiltrating cell level
Data ID Disease Sample number Sample type
LIHC (TCGA) Liver hepatocellular carcinoma 424 Liver hepatocellular carcinoma HCV (HBV+)(86), Liver hepatocellular carcinoma HCV (HBV-)(19), Liver hepatocellular carcinoma (HBV+)(209), Liver hepatocellular carcinoma (HBV+)(60), Paracancerous HCV (HBV+)(4), Paracancerous (HBV-)(28), Paracancerous (HBV+)(18)

> Dataset: LIHC

HeatMap of cell type fractions in all samples Lollipop of ELAVL3 expression and immune infiltrating cell level correlation result in HBV+ samples
ELAVL3 expression: Low -> High

Contents
Description

Gene Information Note

  • Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in the "Target gene [gene] related to VIS" section

Immune Analysis Plot Note

  • Left: Heatmap of target gene expression and the level of various types of immune cells (cell type fractions) in all samples based on CIBERSORT method.
  • Right: Correlation of target gene expression and the level of various types of immune cells in virus positive samples (Pearson Correlation Coefficient).