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HIV Target gene Detail Information

> EHD1 Gene Search Result


Gene Information
Gene Name EHD1
Gene ID 10938
Gene Full Name EH domain containing 1
Gene Alias PAST; PAST1; H-PAST; HPAST1
Transcripts ENSG00000110047
Virus HIV
Gene Type protein coding
HPA Location Info Plasma membrane;
HPA Protein Class Info Plasma proteins, Predicted intracellular proteins
Uniport_ID Q9H4M9
HGNC ID HGNC:3242
VEGA ID OTTHUMG00000066832
OMIM ID 605888
String ID 9606.ENSP00000479153
PharmGKB ID PA27677
Target gene [EHD1] related to VISs
DVID Chromosome HM TFBS CA Sum of Overlapped Records Detail
4000349 chr11 52 229 242 523 View
4001989 chr11 114 5 119 View
4002166 chr11 61 38 9 108 View
4002343 chr11 7 76 15 98 View
4002604 chr11 43 37 7 87 View
4003156 chr11 63 5 68 View
4006356 chr11 23 2 25 View

Relationship between gene expression and immune infiltrating cell level
Data ID Disease Sample number Sample type
GSE17372 (GEO) AIDS-associated lymphoma 17 AIDS-Related Lymphomas (HIV+)(17)
GSE50834 (GEO) HIV-infected disease 44 HIV infected (23), HIV/TB co-infected (21)

> Dataset: GSE17372

HeatMap of cell type fractions in all samples Lollipop of EHD1 expression and immune infiltrating cell level correlation result in HIV+ samples
EHD1 expression: Low -> High

> Dataset: GSE50834

HeatMap of cell type fractions in all samples Lollipop of EHD1 expression and immune infiltrating cell level correlation result in HIV+ samples
EHD1 expression: Low -> High
Contents
Description

Gene Information Note

  • Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in the "Target gene [gene] related to VIS" section

Immune Analysis Plot Note

  • Left: Heatmap of target gene expression and the level of various types of immune cells (cell type fractions) in all samples based on CIBERSORT method.
  • Right: Correlation of target gene expression and the level of various types of immune cells in virus positive samples (Pearson Correlation Coefficient).