HIV Target gene Detail Information

> EEFSEC Gene Search Result

Gene Information

Gene Name	EEFSEC
Gene ID	60678
Gene Full Name	eukaryotic elongation factor, selenocysteine-tRNA specific
Gene Alias	SELB; EFSEC
Transcripts	ENSG00000284869
Virus	HIV
Gene Type	protein coding
HPA Location Info	Nuclear bodies;Nucleoplasm;Cytosol;
HPA Protein Class Info	Predicted intracellular proteins
Uniport_ID	P57772
HGNC ID	HGNC:24614
VEGA ID	OTTHUMG00000159659
OMIM ID	607695
String ID	9606.ENSP00000254730
PharmGKB ID	PA142671916

Target gene [EEFSEC] related to VISs

DVID	Chromosome	HM	TFBS	CA	Sum of Overlapped Records	Detail
4004807	chr3	36	3		39	View
4008354	chr3	14	1		15	View

Relationship between gene expression and immune infiltrating cell level

Data ID	Disease	Sample number	Sample type
GSE17372 (GEO)	AIDS-associated lymphoma	17	AIDS-Related Lymphomas (HIV+)(17)

> Dataset: GSE17372
HeatMap of cell type fractions in all samples	Lollipop of EEFSEC expression and immune infiltrating cell level correlation result in HIV+ samples
EEFSEC expression: Low -> High

Contents
Description

Gene Information Note

Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in the "Target gene [gene] related to VIS" section

Immune Analysis Plot Note

Left: Heatmap of target gene expression and the level of various types of immune cells (cell type fractions) in all samples based on CIBERSORT method.
Right: Correlation of target gene expression and the level of various types of immune cells in virus positive samples (Pearson Correlation Coefficient).