HIV Target gene Detail Information

> EDC3 Gene Search Result


Gene Information
Gene Name EDC3
Gene ID 80153
Gene Full Name enhancer of mRNA decapping 3
Gene Alias YJDC; LSM16; MRT50; YJEFN2; hYjeF_N2-15q23
Transcripts ENSG00000179151
Virus HIV
Gene Type protein coding
HPA Location Info Cytoplasmic bodies;
HPA Protein Class Info Disease related genes, Predicted intracellular proteins
Uniport_ID Q96F86
HGNC ID HGNC:26114
VEGA ID OTTHUMG00000142815
OMIM ID 609842
String ID 9606.ENSP00000320503
PharmGKB ID PA142670551
Target gene [EDC3] related to VISs
DVID Chromosome HM TFBS CA Sum of Overlapped Records Detail
4003309 chr15 19 22 23 64 View
4004232 chr15 45 2 47 View
4012457 chr15 2 3 5 View

Contents
Description

Gene Information Note

  • Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in the "Target gene [gene] related to VIS" section

Immune Analysis Plot Note

  • Left: Heatmap of target gene expression and the level of various types of immune cells (cell type fractions) in all samples based on CIBERSORT method.
  • Right: Correlation of target gene expression and the level of various types of immune cells in virus positive samples (Pearson Correlation Coefficient).