HTLV1 Target gene Detail Information

> ECHS1 Gene Search Result

Gene Information

Gene Name	ECHS1
Gene ID	1892
Gene Full Name	enoyl-CoA hydratase, short chain 1
Gene Alias	SCEH; ECHS1D
Transcripts	ENSG00000127884
Virus	HTLV1
Gene Type	protein coding
HPA Location Info	Mitochondria;
HPA Protein Class Info	Disease related genes, Enzymes, Plasma proteins, Potential drug targets, Predicted intracellular proteins
Gene Function	Oncogene
Uniport_ID	P30084
HGNC ID	HGNC:3151
VEGA ID	OTTHUMG00000019320
OMIM ID	602292
String ID	9606.ENSP00000357535
Drugbank ID	BE0004500
PharmGKB ID	PA27597

Target gene [ECHS1] related to VISs

DVID	Chromosome	HM	TFBS	CA	Sum of Overlapped Records	Detail
6011498	chr10	26			26	View

Relationship between gene expression and immune infiltrating cell level

Data ID	Disease	Sample number	Sample type
GSE55851 (GEO)	Adult T-cell leukemia	21	Normal (3), Asymptomatic carriers (HTLV1+)(6), Adult T-cell Leukemia-lymphoma (HTLV1+)(12)
GSE29312 (GEO)	HTLV-1 associated myelopathy	39	Normal (9), Asymptomatic carriers (HTLV1+)(20), HTLV-1-associated myelopathy (HTLV1+)(10)
GSE29332 (GEO)	HTLV-1 associated myelopathy	35	Normal (8), Asymptomatic carriers (HTLV1+)(17), HTLV-1-associated myelopathy (HTLV1+)(10)

> Dataset: GSE55851
HeatMap of cell type fractions in all samples	Lollipop of ECHS1 expression and immune infiltrating cell level correlation result in HTLV1+ samples
ECHS1 expression: Low -> High

> Dataset: GSE29312
HeatMap of cell type fractions in all samples	Lollipop of ECHS1 expression and immune infiltrating cell level correlation result in HTLV1+ samples
ECHS1 expression: Low -> High

> Dataset: GSE29332
HeatMap of cell type fractions in all samples	Lollipop of ECHS1 expression and immune infiltrating cell level correlation result in HTLV1+ samples
ECHS1 expression: Low -> High

Contents
Description

Gene Information Note

Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in the "Target gene [gene] related to VIS" section

Immune Analysis Plot Note

Left: Heatmap of target gene expression and the level of various types of immune cells (cell type fractions) in all samples based on CIBERSORT method.
Right: Correlation of target gene expression and the level of various types of immune cells in virus positive samples (Pearson Correlation Coefficient).