HBV Target gene Detail Information

> EBPL Gene Search Result


Gene Information
Gene Name EBPL
Gene ID 84650
Gene Full Name EBP like
Gene Alias EBRP
Transcripts ENSG00000123179
Virus HBV
Gene Type protein coding
HPA Location Info Endoplasmic reticulum;
Membrane Info Predicted membrane proteins
HPA Protein Class Info Predicted membrane proteins
Uniport_ID Q9BY08
HGNC ID HGNC:18061
VEGA ID OTTHUMG00000016920
OMIM ID 617335
String ID 9606.ENSP00000242827
PharmGKB ID PA134875632
Target gene [EBPL] related to VISs
DVID Chromosome HM TFBS CA Sum of Overlapped Records Detail
1000102 chr13 3049 2007 1702 6758 View
1002821 chr13 25 175 2 202 View
1002834 chr13 24 175 2 201 View
1002909 chr13 17 173 2 192 View

Relationship between gene expression and immune infiltrating cell level
Data ID Disease Sample number Sample type
GSE114783 (GEO) Chronic HBV (CHB) infection 36 Chronic hepatitis B patients (HBV+)(10),Hepatocellular carcinoma (HBV+)(10),Liver cirrhosis(HBV+)(10),Normal(3),HBV carriers (3)
GSE114783 (GEO) Hepatocellular carcinoma 36 Chronic hepatitis B patients (HBV+)(10),Hepatocellular carcinoma (HBV+)(10),Liver cirrhosis(HBV+)(10),Normal(3),HBV carriers (3)
GSE114783 (GEO) Liver cirrhosis 36 Chronic hepatitis B patients (HBV+)(10),Hepatocellular carcinoma (HBV+)(10),Liver cirrhosis(HBV+)(10),Normal(3),HBV carriers (3)
LIHC (TCGA) Liver hepatocellular carcinoma 424 Liver hepatocellular carcinoma HCV (HBV+)(86), Liver hepatocellular carcinoma HCV (HBV-)(19), Liver hepatocellular carcinoma (HBV+)(209), Liver hepatocellular carcinoma (HBV+)(60), Paracancerous HCV (HBV+)(4), Paracancerous (HBV-)(28), Paracancerous (HBV+)(18)

> Dataset: GSE114783

HeatMap of cell type fractions in all samples Lollipop of EBPL expression and immune infiltrating cell level correlation result in HBV+ Chronic HBV (CHB) infection samples
EBPL expression: Low -> High
Lollipop of EBPL expression and immune infiltrating cell level correlation result in HBV+ Liver cirrhosis samples Lollipop of EBPL expression and immune infiltrating cell level correlation result in HBV+ Hepatocellular carcinoma samples

> Dataset: LIHC

HeatMap of cell type fractions in all samples Lollipop of EBPL expression and immune infiltrating cell level correlation result in HBV+ samples
EBPL expression: Low -> High

Contents
Description

Gene Information Note

  • Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in the "Target gene [gene] related to VIS" section

Immune Analysis Plot Note

  • Left: Heatmap of target gene expression and the level of various types of immune cells (cell type fractions) in all samples based on CIBERSORT method.
  • Right: Correlation of target gene expression and the level of various types of immune cells in virus positive samples (Pearson Correlation Coefficient).