HIV Target gene Detail Information

> E2F5 Gene Search Result


Gene Information
Gene Name E2F5
Gene ID 1875
Gene Full Name E2F transcription factor 5
Gene Alias E2F-5
Transcripts ENSG00000133740
Virus HIV
Gene Type protein coding
HPA Location Info Nucleoplasm;Nucleoli;Vesicles;
Membrane Info Predicted membrane proteins
HPA Protein Class Info Cancer-related genes, Predicted intracellular proteins, Predicted membrane proteins, Transcription factors
Gene Function Oncogene
Uniport_ID Q15329
HGNC ID HGNC:3119
VEGA ID OTTHUMG00000164785
OMIM ID 600967
String ID 9606.ENSP00000398124
PharmGKB ID PA27577
Target gene [E2F5] related to VISs
DVID Chromosome HM TFBS CA Sum of Overlapped Records Detail
4003761 chr8 42 13 55 View
4012363 chr8 3 2 5 View

Relationship between gene expression and immune infiltrating cell level
Data ID Disease Sample number Sample type
GSE17372 (GEO) AIDS-associated lymphoma 17 AIDS-Related Lymphomas (HIV+)(17)
GSE50834 (GEO) HIV-infected disease 44 HIV infected (23), HIV/TB co-infected (21)

> Dataset: GSE17372

HeatMap of cell type fractions in all samples Lollipop of E2F5 expression and immune infiltrating cell level correlation result in HIV+ samples
E2F5 expression: Low -> High

> Dataset: GSE50834

HeatMap of cell type fractions in all samples Lollipop of E2F5 expression and immune infiltrating cell level correlation result in HIV+ samples
E2F5 expression: Low -> High

Contents
Description

Gene Information Note

  • Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in the "Target gene [gene] related to VIS" section

Immune Analysis Plot Note

  • Left: Heatmap of target gene expression and the level of various types of immune cells (cell type fractions) in all samples based on CIBERSORT method.
  • Right: Correlation of target gene expression and the level of various types of immune cells in virus positive samples (Pearson Correlation Coefficient).