HBV Target gene Detail Information

> DUX4 Gene Search Result


Gene Information
Gene Name DUX4
Gene ID 100288687
Gene Full Name double homeobox 4
Gene Alias DUX4L
Transcripts ENSG00000283949
Virus HBV
Gene Type protein coding
HPA Location Info Nucleoli;Nucleoplasm;Cytosol;Golgi apparatus;
HPA Protein Class Info Disease related genes, Potential drug targets, Predicted intracellular proteins, Transcription factors, Transporters
Uniport_ID Q9UBX2
HGNC ID HGNC:50800
VEGA ID OTTHUMG00000175568
OMIM ID 606009
String ID 9606.ENSP00000458065
PharmGKB ID PA166180605
Target gene [DUX4] related to VISs
DVID Chromosome HM TFBS CA Sum of Overlapped Records Detail
1400236 chr18 188 197 103 488 View
1404563 chr10 1 1 View

Relationship between gene expression and immune infiltrating cell level
Data ID Disease Sample number Sample type
LIHC (TCGA) Liver hepatocellular carcinoma 424 Liver hepatocellular carcinoma HCV (HBV+)(86), Liver hepatocellular carcinoma HCV (HBV-)(19), Liver hepatocellular carcinoma (HBV+)(209), Liver hepatocellular carcinoma (HBV+)(60), Paracancerous HCV (HBV+)(4), Paracancerous (HBV-)(28), Paracancerous (HBV+)(18)

> Dataset: LIHC

HeatMap of cell type fractions in all samples Lollipop of DUX4 expression and immune infiltrating cell level correlation result in HBV+ samples
DUX4 expression: Low -> High

Contents
Description

Gene Information Note

  • Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in the "Target gene [gene] related to VIS" section

Immune Analysis Plot Note

  • Left: Heatmap of target gene expression and the level of various types of immune cells (cell type fractions) in all samples based on CIBERSORT method.
  • Right: Correlation of target gene expression and the level of various types of immune cells in virus positive samples (Pearson Correlation Coefficient).