HIV Target gene Detail Information

> DNMT3B Gene Search Result


Gene Information
Gene Name DNMT3B
Gene ID 1789
Gene Full Name DNA methyltransferase 3 beta
Gene Alias ICF; ICF1; M.HsaIIIB
Transcripts ENSG00000088305
Virus HIV
Gene Type protein coding
HPA Location Info Nucleoplasm;
HPA Protein Class Info Disease related genes, Enzymes, Potential drug targets, Predicted intracellular proteins, Transcription factors
Gene Function Suppressor gene
Uniport_ID Q9UBC3
HGNC ID HGNC:2979
VEGA ID OTTHUMG00000032226
OMIM ID 602900
String ID 9606.ENSP00000328547
Drugbank ID BE0010437; BE0010009
PharmGKB ID PA27446
Target gene [DNMT3B] related to VISs
DVID Chromosome HM TFBS CA Sum of Overlapped Records Detail
4001047 chr20 72 33 120 225 View

Relationship between gene expression and immune infiltrating cell level
Data ID Disease Sample number Sample type
GSE17372 (GEO) AIDS-associated lymphoma 17 AIDS-Related Lymphomas (HIV+)(17)

> Dataset: GSE17372

HeatMap of cell type fractions in all samples Lollipop of DNMT3B expression and immune infiltrating cell level correlation result in HIV+ samples
DNMT3B expression: Low -> High

Contents
Description

Gene Information Note

  • Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in the "Target gene [gene] related to VIS" section

Immune Analysis Plot Note

  • Left: Heatmap of target gene expression and the level of various types of immune cells (cell type fractions) in all samples based on CIBERSORT method.
  • Right: Correlation of target gene expression and the level of various types of immune cells in virus positive samples (Pearson Correlation Coefficient).