HBV Target gene Detail Information

> DIRC3 Gene Search Result


Gene Information
Gene Name DIRC3
Gene ID 729582
Virus HBV
Gene Type ncRNA
HPA Protein Class Info Predicted intracellular proteins
HGNC ID HGNC:17805
VEGA ID OTTHUMG00000155287
OMIM ID 608262
String ID 9606.ENSP00000389455
PharmGKB ID PA134944938
Target gene [DIRC3] related to VISs
DVID Chromosome HM TFBS CA Sum of Overlapped Records Detail
1001831 chr2 268 99 98 465 View
1003845 chr2 97 7 1 105 View
1013139 chr2 2 3 5 View
1401563 chr2 2 3 5 View

Relationship between gene expression and immune infiltrating cell level
Data ID Disease Sample number Sample type
LIHC (TCGA) Liver hepatocellular carcinoma 424 Liver hepatocellular carcinoma HCV (HBV+)(86), Liver hepatocellular carcinoma HCV (HBV-)(19), Liver hepatocellular carcinoma (HBV+)(209), Liver hepatocellular carcinoma (HBV+)(60), Paracancerous HCV (HBV+)(4), Paracancerous (HBV-)(28), Paracancerous (HBV+)(18)

> Dataset: LIHC

HeatMap of cell type fractions in all samples Lollipop of DIRC3 expression and immune infiltrating cell level correlation result in HBV+ samples
DIRC3 expression: Low -> High

Contents
Description

Gene Information Note

  • Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in the "Target gene [gene] related to VIS" section

Immune Analysis Plot Note

  • Left: Heatmap of target gene expression and the level of various types of immune cells (cell type fractions) in all samples based on CIBERSORT method.
  • Right: Correlation of target gene expression and the level of various types of immune cells in virus positive samples (Pearson Correlation Coefficient).