HIV Target gene Detail Information

> DEDD2 Gene Search Result

Gene Information

Gene Name	DEDD2
Gene ID	162989
Gene Full Name	death effector domain containing 2
Gene Alias	FLAME3; FLAME-3
Transcripts	ENSG00000160570
Virus	HIV
Gene Type	protein coding
HPA Location Info	Nucleoplasm;
HPA Protein Class Info	Predicted intracellular proteins
Uniport_ID	Q8WXF8
HGNC ID	HGNC:24450
VEGA ID	OTTHUMG00000182763
OMIM ID	617078
String ID	9606.ENSP00000470082
PharmGKB ID	PA134912744

Target gene [DEDD2] related to VISs

DVID	Chromosome	HM	TFBS	CA	Sum of Overlapped Records	Detail
4000310	chr19	68	269	219	556	View
4002649	chr19	83	2		85	View
4009942	chr19	8	2		10	View
4012937	chr19	3	1		4	View

Relationship between gene expression and immune infiltrating cell level

Data ID	Disease	Sample number	Sample type
GSE17372 (GEO)	AIDS-associated lymphoma	17	AIDS-Related Lymphomas (HIV+)(17)
GSE50834 (GEO)	HIV-infected disease	44	HIV infected (23), HIV/TB co-infected (21)

> Dataset: GSE17372
HeatMap of cell type fractions in all samples	Lollipop of DEDD2 expression and immune infiltrating cell level correlation result in HIV+ samples
DEDD2 expression: Low -> High

> Dataset: GSE50834
HeatMap of cell type fractions in all samples	Lollipop of DEDD2 expression and immune infiltrating cell level correlation result in HIV+ samples
DEDD2 expression: Low -> High

Contents
Description

Gene Information Note

Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in the "Target gene [gene] related to VIS" section

Immune Analysis Plot Note

Left: Heatmap of target gene expression and the level of various types of immune cells (cell type fractions) in all samples based on CIBERSORT method.
Right: Correlation of target gene expression and the level of various types of immune cells in virus positive samples (Pearson Correlation Coefficient).