HIV Target gene Detail Information

> DDX46 Gene Search Result

Gene Information

Gene Name	DDX46
Gene ID	9879
Gene Full Name	DEAD-box helicase 46
Gene Alias	Prp5; PRPF5
Transcripts	ENSG00000145833
Virus	HIV
Gene Type	protein coding
HPA Location Info	Nuclear speckles;Nucleoli fibrillar center;
HPA Protein Class Info	Enzymes, Plasma proteins, Predicted intracellular proteins
Uniport_ID	Q7L014
HGNC ID	HGNC:18681
VEGA ID	OTTHUMG00000163072
OMIM ID	617848
String ID	9606.ENSP00000416534
PharmGKB ID	PA134894452

Target gene [DDX46] related to VISs

DVID	Chromosome	HM	TFBS	CA	Sum of Overlapped Records	Detail
4003098	chr5	64	3	2	69	View
4003872	chr5	51	2		53	View
4006705	chr5	14	8	1	23	View
4009970	chr5	8	2		10	View
4010247	chr5	5	4		9	View
4010753	chr5	5	3		8	View
4013114	chr5	3	1		4	View
4014504	chr5	2			2	View
4014505	chr5	2			2	View

Contents
Description

Gene Information Note

Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in the "Target gene [gene] related to VIS" section

Immune Analysis Plot Note

Left: Heatmap of target gene expression and the level of various types of immune cells (cell type fractions) in all samples based on CIBERSORT method.
Right: Correlation of target gene expression and the level of various types of immune cells in virus positive samples (Pearson Correlation Coefficient).