HIV Target gene Detail Information

> DDX42 Gene Search Result

Gene Information

Gene Name	DDX42
Gene ID	11325
Gene Full Name	DEAD-box helicase 42
Gene Alias	RHELP; RNAHP; SF3B8; DDX42P; SF3b125
Transcripts	ENSG00000198231
Virus	HIV
Gene Type	protein coding
HPA Location Info	Nuclear speckles;
HPA Protein Class Info	Enzymes, Plasma proteins, Predicted intracellular proteins
Uniport_ID	Q86XP3
HGNC ID	HGNC:18676
VEGA ID	OTTHUMG00000179011
OMIM ID	613369
String ID	9606.ENSP00000464050
PharmGKB ID	PA134875761

Target gene [DDX42] related to VISs

DVID	Chromosome	HM	TFBS	CA	Sum of Overlapped Records	Detail
4005496	chr17	32			32	View
4006656	chr17	13	6	4	23	View
4007222	chr17	18	2		20	View
4008943	chr17	6	7		13	View
4009331	chr17	9	1	2	12	View
4012919	chr17	3	1		4	View
4013173	chr17	3	1		4	View
4014163	chr17	2			2	View

Contents
Description

Gene Information Note

Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in the "Target gene [gene] related to VIS" section

Immune Analysis Plot Note

Left: Heatmap of target gene expression and the level of various types of immune cells (cell type fractions) in all samples based on CIBERSORT method.
Right: Correlation of target gene expression and the level of various types of immune cells in virus positive samples (Pearson Correlation Coefficient).