HIV Target gene Detail Information

> DDX19B Gene Search Result

Gene Information

Gene Name	DDX19B
Gene ID	11269
Gene Full Name	DEAD-box helicase 19B
Gene Alias	DBP5; RNAh; DDX19
Transcripts	ENSG00000157349
Virus	HIV
Gene Type	protein coding
HPA Location Info	Nucleoplasm;
HPA Protein Class Info	Enzymes, Plasma proteins, Predicted intracellular proteins, Transporters
Uniport_ID	Q9UMR2
HGNC ID	HGNC:2742
VEGA ID	OTTHUMG00000137577
OMIM ID	605812
String ID	9606.ENSP00000288071
PharmGKB ID	PA27208

Target gene [DDX19B] related to VISs

DVID	Chromosome	HM	TFBS	CA	Sum of Overlapped Records	Detail
4000010	chr16	3014	111	190	3315	View
4015627	chr16	1			1	View

Relationship between gene expression and immune infiltrating cell level

Data ID	Disease	Sample number	Sample type
GSE17372 (GEO)	AIDS-associated lymphoma	17	AIDS-Related Lymphomas (HIV+)(17)
GSE50834 (GEO)	HIV-infected disease	44	HIV infected (23), HIV/TB co-infected (21)

> Dataset: GSE17372
HeatMap of cell type fractions in all samples	Lollipop of DDX19B expression and immune infiltrating cell level correlation result in HIV+ samples
DDX19B expression: Low -> High

> Dataset: GSE50834
HeatMap of cell type fractions in all samples	Lollipop of DDX19B expression and immune infiltrating cell level correlation result in HIV+ samples
DDX19B expression: Low -> High

Contents
Description

Gene Information Note

Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in the "Target gene [gene] related to VIS" section

Immune Analysis Plot Note

Left: Heatmap of target gene expression and the level of various types of immune cells (cell type fractions) in all samples based on CIBERSORT method.
Right: Correlation of target gene expression and the level of various types of immune cells in virus positive samples (Pearson Correlation Coefficient).