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HBV Target gene Detail Information

> DDX11L2 Gene Search Result


Gene Information
Gene Name DDX11L2
Gene ID 84771
Transcripts ENSG00000223972
Virus HBV
Gene Type pseudo
HPA Location Info
HGNC ID HGNC:37103
VEGA ID OTTHUMG00000047823
PharmGKB ID PA165696559
Target gene [DDX11L2] related to VISs
DVID Chromosome HM TFBS CA Sum of Overlapped Records Detail
1000143 chr2 3652 1251 557 5460 View
1000175 chr2 3533 1021 318 4872 View
1000182 chr2 3484 898 275 4657 View
1000200 chr2 3371 700 213 4284 View
1000211 chr2 3286 609 157 4052 View
1000239 chr2 3039 449 91 3579 View
1001398 chr2 66 560 113 739 View
1004344 chr2 54 30 84 View
1400735 chr2 3533 1021 318 4872 View
1401826 chr2 3652 1251 557 5460 View
1401827 chr2 3039 449 91 3579 View
1401828 chr2 3286 609 157 4052 View
1403220 chr2 54 30 84 View
1403258 chr2 3484 898 275 4657 View

Relationship between gene expression and immune infiltrating cell level
Data ID Disease Sample number Sample type
LIHC (TCGA) Liver hepatocellular carcinoma 424 Liver hepatocellular carcinoma HCV (HBV+)(86), Liver hepatocellular carcinoma HCV (HBV-)(19), Liver hepatocellular carcinoma (HBV+)(209), Liver hepatocellular carcinoma (HBV+)(60), Paracancerous HCV (HBV+)(4), Paracancerous (HBV-)(28), Paracancerous (HBV+)(18)

> Dataset: LIHC

HeatMap of cell type fractions in all samples Lollipop of DDX11L2 expression and immune infiltrating cell level correlation result in HBV+ samples
DDX11L2 expression: Low -> High
Contents
Description

Gene Information Note

  • Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in the "Target gene [gene] related to VIS" section

Immune Analysis Plot Note

  • Left: Heatmap of target gene expression and the level of various types of immune cells (cell type fractions) in all samples based on CIBERSORT method.
  • Right: Correlation of target gene expression and the level of various types of immune cells in virus positive samples (Pearson Correlation Coefficient).