HIV Target gene Detail Information

> DDR2 Gene Search Result


Gene Information
Gene Name DDR2
Gene ID 4921
Gene Full Name discoidin domain receptor tyrosine kinase 2
Gene Alias TKT; MIG20a; NTRKR3; TYRO10
Transcripts ENSG00000162733
Virus HIV
Gene Type protein coding
HPA Location Info Actin filaments;Plasma membrane;
Membrane Info Predicted membrane proteins
HPA Protein Class Info Cancer-related genes, CD markers, Disease related genes, Enzymes, FDA approved drug targets, Predicted intracellular proteins, Predicted membrane proteins
Gene Function Suppressor gene
Uniport_ID Q16832
HGNC ID HGNC:2731
VEGA ID OTTHUMG00000034423
OMIM ID 191311
String ID 9606.ENSP00000356899
Rfam ID RF01569
Drugbank ID BE0004741
PharmGKB ID PA27196
Target gene [DDR2] related to VISs
DVID Chromosome HM TFBS CA Sum of Overlapped Records Detail
4013834 chr1 2 1 3 View

Relationship between gene expression and immune infiltrating cell level
Data ID Disease Sample number Sample type
GSE17372 (GEO) AIDS-associated lymphoma 17 AIDS-Related Lymphomas (HIV+)(17)

> Dataset: GSE17372

HeatMap of cell type fractions in all samples Lollipop of DDR2 expression and immune infiltrating cell level correlation result in HIV+ samples
DDR2 expression: Low -> High

Contents
Description

Gene Information Note

  • Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in the "Target gene [gene] related to VIS" section

Immune Analysis Plot Note

  • Left: Heatmap of target gene expression and the level of various types of immune cells (cell type fractions) in all samples based on CIBERSORT method.
  • Right: Correlation of target gene expression and the level of various types of immune cells in virus positive samples (Pearson Correlation Coefficient).