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HBV Target gene Detail Information

> DDIT3 Gene Search Result


Gene Information
Gene Name DDIT3
Gene ID 1649
Gene Full Name DNA damage inducible transcript 3
Gene Alias CHOP; CEBPZ; CHOP10; CHOP-10; GADD153; AltDDIT3; C/EBPzeta
Transcripts ENSG00000175197
Virus HBV
Gene Type protein coding
HPA Location Info Nucleoplasm;
HPA Protein Class Info Cancer-related genes, Disease related genes, Predicted intracellular proteins, Transcription factors
Gene Function Oncogene
Uniport_ID P35638
HGNC ID HGNC:2726
VEGA ID OTTHUMG00000170046
OMIM ID 126337
String ID 9606.ENSP00000448665
PharmGKB ID PA27193
Target gene [DDIT3] related to VISs
DVID Chromosome HM TFBS CA Sum of Overlapped Records Detail
1003325 chr12 133 11 144 View
1003326 chr12 133 11 144 View

Relationship between gene expression and immune infiltrating cell level
Data ID Disease Sample number Sample type
GSE114783 (GEO) Chronic HBV (CHB) infection 36 Chronic hepatitis B patients (HBV+)(10),Hepatocellular carcinoma (HBV+)(10),Liver cirrhosis(HBV+)(10),Normal(3),HBV carriers (3)
GSE114783 (GEO) Hepatocellular carcinoma 36 Chronic hepatitis B patients (HBV+)(10),Hepatocellular carcinoma (HBV+)(10),Liver cirrhosis(HBV+)(10),Normal(3),HBV carriers (3)
GSE114783 (GEO) Liver cirrhosis 36 Chronic hepatitis B patients (HBV+)(10),Hepatocellular carcinoma (HBV+)(10),Liver cirrhosis(HBV+)(10),Normal(3),HBV carriers (3)
LIHC (TCGA) Liver hepatocellular carcinoma 424 Liver hepatocellular carcinoma HCV (HBV+)(86), Liver hepatocellular carcinoma HCV (HBV-)(19), Liver hepatocellular carcinoma (HBV+)(209), Liver hepatocellular carcinoma (HBV+)(60), Paracancerous HCV (HBV+)(4), Paracancerous (HBV-)(28), Paracancerous (HBV+)(18)

> Dataset: GSE114783

HeatMap of cell type fractions in all samples Lollipop of DDIT3 expression and immune infiltrating cell level correlation result in HBV+ Chronic HBV (CHB) infection samples
DDIT3 expression: Low -> High
Lollipop of DDIT3 expression and immune infiltrating cell level correlation result in HBV+ Liver cirrhosis samples Lollipop of DDIT3 expression and immune infiltrating cell level correlation result in HBV+ Hepatocellular carcinoma samples

> Dataset: LIHC

HeatMap of cell type fractions in all samples Lollipop of DDIT3 expression and immune infiltrating cell level correlation result in HBV+ samples
DDIT3 expression: Low -> High
Contents
Description

Gene Information Note

  • Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in the "Target gene [gene] related to VIS" section

Immune Analysis Plot Note

  • Left: Heatmap of target gene expression and the level of various types of immune cells (cell type fractions) in all samples based on CIBERSORT method.
  • Right: Correlation of target gene expression and the level of various types of immune cells in virus positive samples (Pearson Correlation Coefficient).