HIV Target gene Detail Information

> DCP1A Gene Search Result

Gene Information

Gene Name	DCP1A
Gene ID	55802
Gene Full Name	decapping mRNA 1A
Gene Alias	SMIF; SMAD4IP1; HSA275986; Nbla00360
Transcripts	ENSG00000272886
Virus	HIV
Gene Type	protein coding
HPA Location Info	Cytoplasmic bodies;
HPA Protein Class Info	Plasma proteins, Predicted intracellular proteins, Transporters
Uniport_ID	Q9NPI6
HGNC ID	HGNC:18714
VEGA ID	OTTHUMG00000158193
OMIM ID	607010
String ID	9606.ENSP00000476046
PharmGKB ID	PA134931379

Target gene [DCP1A] related to VISs

DVID	Chromosome	HM	TFBS	CA	Sum of Overlapped Records	Detail
4014630	chr3	1	1		2	View

Relationship between gene expression and immune infiltrating cell level

Data ID	Disease	Sample number	Sample type
GSE17372 (GEO)	AIDS-associated lymphoma	17	AIDS-Related Lymphomas (HIV+)(17)
GSE50834 (GEO)	HIV-infected disease	44	HIV infected (23), HIV/TB co-infected (21)

> Dataset: GSE17372
HeatMap of cell type fractions in all samples	Lollipop of DCP1A expression and immune infiltrating cell level correlation result in HIV+ samples
DCP1A expression: Low -> High

> Dataset: GSE50834
HeatMap of cell type fractions in all samples	Lollipop of DCP1A expression and immune infiltrating cell level correlation result in HIV+ samples
DCP1A expression: Low -> High

Contents
Description

Gene Information Note

Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in the "Target gene [gene] related to VIS" section

Immune Analysis Plot Note

Left: Heatmap of target gene expression and the level of various types of immune cells (cell type fractions) in all samples based on CIBERSORT method.
Right: Correlation of target gene expression and the level of various types of immune cells in virus positive samples (Pearson Correlation Coefficient).