HIV Target gene Detail Information

> DCAF13 Gene Search Result

Gene Information

Gene Name	DCAF13
Gene ID	25879
Gene Full Name	DDB1 and CUL4 associated factor 13
Gene Alias	GM83; Sof1; WDSOF1; HSPC064
Transcripts	ENSG00000164934
Virus	HIV
Gene Type	protein coding
HPA Location Info	Nucleoli;Nucleoplasm;Cell Junctions;Centrosome;Cytosol;
HPA Protein Class Info	Predicted intracellular proteins
Uniport_ID	Q9NV06
HGNC ID	HGNC:24535
VEGA ID	OTTHUMG00000164888
OMIM ID	616196
String ID	9606.ENSP00000297579
PharmGKB ID	PA165585440

Target gene [DCAF13] related to VISs

DVID	Chromosome	HM	TFBS	CA	Sum of Overlapped Records	Detail
4004417	chr8	33	8	3	44	View

Relationship between gene expression and immune infiltrating cell level

Data ID	Disease	Sample number	Sample type
GSE17372 (GEO)	AIDS-associated lymphoma	17	AIDS-Related Lymphomas (HIV+)(17)

> Dataset: GSE17372
HeatMap of cell type fractions in all samples	Lollipop of DCAF13 expression and immune infiltrating cell level correlation result in HIV+ samples
DCAF13 expression: Low -> High

Contents
Description

Gene Information Note

Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in the "Target gene [gene] related to VIS" section

Immune Analysis Plot Note

Left: Heatmap of target gene expression and the level of various types of immune cells (cell type fractions) in all samples based on CIBERSORT method.
Right: Correlation of target gene expression and the level of various types of immune cells in virus positive samples (Pearson Correlation Coefficient).