HTLV1 Target gene Detail Information

> DCAF10 Gene Search Result


Gene Information
Gene Name DCAF10
Gene ID 79269
Gene Full Name DDB1 and CUL4 associated factor 10
Gene Alias WDR32
Transcripts ENSG00000122741
Virus HTLV1
Gene Type protein coding
HPA Location Info Nucleoli fibrillar center;
HPA Protein Class Info Predicted intracellular proteins
Uniport_ID Q5QP82
HGNC ID HGNC:23686
VEGA ID OTTHUMG00000019934
String ID 9606.ENSP00000366953
PharmGKB ID PA165585713
Target gene [DCAF10] related to VISs
DVID Chromosome HM TFBS CA Sum of Overlapped Records Detail
6017130 chr9 11 11 View
6021868 chr9 1 4 5 View

Relationship between gene expression and immune infiltrating cell level
Data ID Disease Sample number Sample type
GSE55851 (GEO) Adult T-cell leukemia 21 Normal (3), Asymptomatic carriers (HTLV1+)(6), Adult T-cell Leukemia-lymphoma (HTLV1+)(12)

> Dataset: GSE55851

HeatMap of cell type fractions in all samples Lollipop of DCAF10 expression and immune infiltrating cell level correlation result in HTLV1+ samples
DCAF10 expression: Low -> High

Contents
Description

Gene Information Note

  • Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in the "Target gene [gene] related to VIS" section

Immune Analysis Plot Note

  • Left: Heatmap of target gene expression and the level of various types of immune cells (cell type fractions) in all samples based on CIBERSORT method.
  • Right: Correlation of target gene expression and the level of various types of immune cells in virus positive samples (Pearson Correlation Coefficient).