HTLV1 Target gene Detail Information

> CYTH3 Gene Search Result


Gene Information
Gene Name CYTH3
Gene ID 9265
Gene Full Name cytohesin 3
Gene Alias GRP1; ARNO3; PSCD3; cytohesin-3
Transcripts ENSG00000008256
Virus HTLV1
Gene Type protein coding
HPA Location Info Cytosol;Nucleoplasm;
HPA Protein Class Info Predicted intracellular proteins
Uniport_ID O43739
HGNC ID HGNC:9504
VEGA ID OTTHUMG00000023440
OMIM ID 605081
String ID 9606.ENSP00000297044
Drugbank ID BE0004433
PharmGKB ID PA164718590
Target gene [CYTH3] related to VISs
DVID Chromosome HM TFBS CA Sum of Overlapped Records Detail
6002106 chr7 39 200 46 285 View
6005651 chr7 68 15 83 View
6006945 chr7 24 13 24 61 View
6011171 chr7 20 7 27 View

Relationship between gene expression and immune infiltrating cell level
Data ID Disease Sample number Sample type
GSE55851 (GEO) Adult T-cell leukemia 21 Normal (3), Asymptomatic carriers (HTLV1+)(6), Adult T-cell Leukemia-lymphoma (HTLV1+)(12)

> Dataset: GSE55851

HeatMap of cell type fractions in all samples Lollipop of CYTH3 expression and immune infiltrating cell level correlation result in HTLV1+ samples
CYTH3 expression: Low -> High

Contents
Description

Gene Information Note

  • Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in the "Target gene [gene] related to VIS" section

Immune Analysis Plot Note

  • Left: Heatmap of target gene expression and the level of various types of immune cells (cell type fractions) in all samples based on CIBERSORT method.
  • Right: Correlation of target gene expression and the level of various types of immune cells in virus positive samples (Pearson Correlation Coefficient).