HBV Target gene Detail Information

> CYP2C19 Gene Search Result


Gene Information
Gene Name CYP2C19
Gene ID 1557
Gene Full Name cytochrome P450 family 2 subfamily C member 19
Gene Alias CPCJ; CYP2C; P450C2C; CYPIIC17; CYPIIC19; P450IIC19
Transcripts ENSG00000165841
Virus HBV
Gene Type protein coding
HPA Location Info
HPA Protein Class Info Cancer-related genes, Enzymes, Plasma proteins, Predicted intracellular proteins
Uniport_ID P33261
HGNC ID HGNC:2621
VEGA ID OTTHUMG00000018799
OMIM ID 124020
String ID 9606.ENSP00000360372
Drugbank ID BE0003536
PharmGKB ID PA124
FDA Approved Drug Brivaracetam;Carisoprodol;Citalopram;Clobazam;Clopidogrel;Dexlansoprazole;Diazepam;Doxepin;Drospirenone;Ethinyl Estradiol;Escitalopram;Esomeprazole;Flibanserin;Formoterol;Lacosamide;Lansoprazole;Omeprazole;Pantoprazole;Phenytoin;Prasugrel;Rabeprazole;Ticagrelor;Voriconazole
Target gene [CYP2C19] related to VISs
DVID Chromosome HM TFBS CA Sum of Overlapped Records Detail
1017246 chr10 1 1 View
1017565 chr10 0 View
1404582 chr10 1 1 View

Relationship between gene expression and immune infiltrating cell level
Data ID Disease Sample number Sample type
LIHC (TCGA) Liver hepatocellular carcinoma 424 Liver hepatocellular carcinoma HCV (HBV+)(86), Liver hepatocellular carcinoma HCV (HBV-)(19), Liver hepatocellular carcinoma (HBV+)(209), Liver hepatocellular carcinoma (HBV+)(60), Paracancerous HCV (HBV+)(4), Paracancerous (HBV-)(28), Paracancerous (HBV+)(18)

> Dataset: LIHC

HeatMap of cell type fractions in all samples Lollipop of CYP2C19 expression and immune infiltrating cell level correlation result in HBV+ samples
CYP2C19 expression: Low -> High

Contents
Description

Gene Information Note

  • Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in the "Target gene [gene] related to VIS" section

Immune Analysis Plot Note

  • Left: Heatmap of target gene expression and the level of various types of immune cells (cell type fractions) in all samples based on CIBERSORT method.
  • Right: Correlation of target gene expression and the level of various types of immune cells in virus positive samples (Pearson Correlation Coefficient).