HIV Target gene Detail Information

> CXCL13 Gene Search Result

Gene Information

Gene Name	CXCL13
Gene ID	10563
Gene Full Name	C-X-C motif chemokine ligand 13
Gene Alias	BLC; BCA1; ANGIE; BCA-1; BLR1L; ANGIE2; SCYB13
Transcripts	ENSG00000156234
Virus	HIV
Gene Type	protein coding
HPA Location Info
HPA Protein Class Info	Cancer-related genes, Predicted secreted proteins
Uniport_ID	O43927
HGNC ID	HGNC:10639
VEGA ID	OTTHUMG00000130201
OMIM ID	605149
String ID	9606.ENSP00000286758
PharmGKB ID	PA35570

Target gene [CXCL13] related to VISs

DVID	Chromosome	HM	TFBS	CA	Sum of Overlapped Records	Detail
4000216	chr4	272	145	296	713	View

Relationship between gene expression and immune infiltrating cell level

Data ID	Disease	Sample number	Sample type
GSE17372 (GEO)	AIDS-associated lymphoma	17	AIDS-Related Lymphomas (HIV+)(17)

> Dataset: GSE17372
HeatMap of cell type fractions in all samples	Lollipop of CXCL13 expression and immune infiltrating cell level correlation result in HIV+ samples
CXCL13 expression: Low -> High

Contents
Description

Gene Information Note

Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in the "Target gene [gene] related to VIS" section

Immune Analysis Plot Note

Left: Heatmap of target gene expression and the level of various types of immune cells (cell type fractions) in all samples based on CIBERSORT method.
Right: Correlation of target gene expression and the level of various types of immune cells in virus positive samples (Pearson Correlation Coefficient).