Home
Virus
Gene
Disease
Dataset
Download
Help
 
HTLV1 Target gene Detail Information

> CTNNAL1 Gene Search Result


Gene Information
Gene Name CTNNAL1
Gene ID 8727
Gene Full Name catenin alpha like 1
Gene Alias ACRP; CLLP; alpha-CATU
Transcripts ENSG00000119326
Virus HTLV1
Gene Type protein coding
HPA Location Info
HPA Protein Class Info Predicted intracellular proteins
Uniport_ID Q9UBT7
HGNC ID HGNC:2512
VEGA ID OTTHUMG00000020466
OMIM ID 604785
String ID 9606.ENSP00000320434
PharmGKB ID PA27011
Target gene [CTNNAL1] related to VISs
DVID Chromosome HM TFBS CA Sum of Overlapped Records Detail
6014887 chr9 15 15 View

Relationship between gene expression and immune infiltrating cell level
Data ID Disease Sample number Sample type
GSE55851 (GEO) Adult T-cell leukemia 21 Normal (3), Asymptomatic carriers (HTLV1+)(6), Adult T-cell Leukemia-lymphoma (HTLV1+)(12)
GSE29312 (GEO) HTLV-1 associated myelopathy 39 Normal (9), Asymptomatic carriers (HTLV1+)(20), HTLV-1-associated myelopathy (HTLV1+)(10)
GSE29332 (GEO) HTLV-1 associated myelopathy 35 Normal (8), Asymptomatic carriers (HTLV1+)(17), HTLV-1-associated myelopathy (HTLV1+)(10)

> Dataset: GSE55851

HeatMap of cell type fractions in all samples Lollipop of CTNNAL1 expression and immune infiltrating cell level correlation result in HTLV1+ samples
CTNNAL1 expression: Low -> High

> Dataset: GSE29312

HeatMap of cell type fractions in all samples Lollipop of CTNNAL1 expression and immune infiltrating cell level correlation result in HTLV1+ samples
CTNNAL1 expression: Low -> High

> Dataset: GSE29332

HeatMap of cell type fractions in all samples Lollipop of CTNNAL1 expression and immune infiltrating cell level correlation result in HTLV1+ samples
CTNNAL1 expression: Low -> High
Contents
Description

Gene Information Note

  • Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in the "Target gene [gene] related to VIS" section

Immune Analysis Plot Note

  • Left: Heatmap of target gene expression and the level of various types of immune cells (cell type fractions) in all samples based on CIBERSORT method.
  • Right: Correlation of target gene expression and the level of various types of immune cells in virus positive samples (Pearson Correlation Coefficient).