HBV Target gene Detail Information

> CTNNA2 Gene Search Result


Gene Information
Gene Name CTNNA2
Gene ID 1496
Gene Full Name catenin alpha 2
Gene Alias CAPR; CTNR; CAP-R; CT114; CDCBM9
Transcripts ENSG00000066032
Virus HBV
Gene Type protein coding
HPA Location Info
HPA Protein Class Info Plasma proteins, Predicted intracellular proteins
Gene Function Suppressor gene
Uniport_ID P26232
HGNC ID HGNC:2510
VEGA ID OTTHUMG00000152903
OMIM ID 114025
String ID 9606.ENSP00000384638
PharmGKB ID PA27009
Target gene [CTNNA2] related to VISs
DVID Chromosome HM TFBS CA Sum of Overlapped Records Detail
1006710 chr2 13 8 14 35 View
1007157 chr2 22 6 2 30 View
1012656 chr2 1 5 6 View
1014238 chr2 1 2 1 4 View
1016005 chr2 1 1 2 View
1018284 chr2 0 View

Relationship between gene expression and immune infiltrating cell level
Data ID Disease Sample number Sample type
LIHC (TCGA) Liver hepatocellular carcinoma 424 Liver hepatocellular carcinoma HCV (HBV+)(86), Liver hepatocellular carcinoma HCV (HBV-)(19), Liver hepatocellular carcinoma (HBV+)(209), Liver hepatocellular carcinoma (HBV+)(60), Paracancerous HCV (HBV+)(4), Paracancerous (HBV-)(28), Paracancerous (HBV+)(18)

> Dataset: LIHC

HeatMap of cell type fractions in all samples Lollipop of CTNNA2 expression and immune infiltrating cell level correlation result in HBV+ samples
CTNNA2 expression: Low -> High

Contents
Description

Gene Information Note

  • Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in the "Target gene [gene] related to VIS" section

Immune Analysis Plot Note

  • Left: Heatmap of target gene expression and the level of various types of immune cells (cell type fractions) in all samples based on CIBERSORT method.
  • Right: Correlation of target gene expression and the level of various types of immune cells in virus positive samples (Pearson Correlation Coefficient).