HPV Target gene Detail Information

> CTIF Gene Search Result

Gene Information

Gene Name	CTIF
Gene ID	9811
Gene Full Name	cap binding complex dependent translation initiation factor
Gene Alias	Gm672; KIAA0427
Transcripts	ENSG00000282825
Virus	HPV
Gene Type	protein coding
HPA Location Info	Cytosol;
HPA Protein Class Info	Predicted intracellular proteins, Transporters
Uniport_ID	O43310
HGNC ID	HGNC:23925
VEGA ID	OTTHUMG00000132656
OMIM ID	613178
String ID	9606.ENSP00000372459
PharmGKB ID	PA134974369

Target gene [CTIF] related to VISs

DVID	Chromosome	HM	TFBS	CA	Sum of Overlapped Records	Detail
5001827	chr18	20	1		21	View
5100002	chr18	926	907	552	2385	View

Relationship between gene expression and immune infiltrating cell level

Data ID	Disease	Sample number	Sample type
GSE140662 (GEO)	Condyloma Acuminatum	8	Condyloma acuminata (HPV+)(5), Skin(3)
GSE40774 (GEO)	Head and neck squamous cell carcinoma	134	Head and neck Squamous cell carcinomas GLOTTIC LARYNX (EBV-)(2), Head and neck Squamous cell carcinomas HYPOPHARYNX (EBV-)(9), Head and neck Squamous cell carcinomas ORAL CAVITY (EBV-)(23), Head and neck Squamous cell carcinomas ORAL CAVITY (EBV+)(2), Head and neck Squamous cell carcinomas OROPHARYNX (EBV-)(22), Head and neck Squamous cell carcinomas OROPHARYNX (EBV+)(54), Head and neck Squamous cell carcinomas OTHER (EBV+)(1), Head and neck Squamous cell carcinomas SUBGLOTTIC LARYNX (EBV-)(1), Head and neck Squamous cell carcinomas SUPRAGLOTTIC (EBV-)(19), Squamous cell carcinomas SUPRAGLOTTIC (EBV+)(1)
GSE55546 (GEO)	Oropharyngeal squamous cell carcinoma	16	Oropharyngeal cancers (HPV+)(12), Normal (4)
GSE55544 (GEO)	Oropharyngeal squamous cell carcinoma	23	Oropharyngeal cancers HPV Active (11), Oropharyngeal cancers HPV Inactive (4), Oropharyngeal cancers HPV Negative (8)
GSE55542 (GEO)	Oropharyngeal squamous cell carcinoma	36	Oropharyngeal cancers HPV Active (12), Oropharyngeal cancers HPV Inactive (8), Oropharyngeal cancers HPV Negative (16)

> Dataset: GSE140662
HeatMap of cell type fractions in all samples	Lollipop of CTIF expression and immune infiltrating cell level correlation result in HPV+ samples
CTIF expression: Low -> High

> Dataset: GSE40774
HeatMap of cell type fractions in all samples	Lollipop of CTIF expression and immune infiltrating cell level correlation result in HPV+ samples
CTIF expression: Low -> High

> Dataset: GSE55546
HeatMap of cell type fractions in all samples	Lollipop of CTIF expression and immune infiltrating cell level correlation result in HPV+ samples
CTIF expression: Low -> High

> Dataset: GSE55544
HeatMap of cell type fractions in all samples	Lollipop of CTIF expression and immune infiltrating cell level correlation result in HPV+ samples
CTIF expression: Low -> High

> Dataset: GSE55542
HeatMap of cell type fractions in all samples	Lollipop of CTIF expression and immune infiltrating cell level correlation result in HPV+ samples
CTIF expression: Low -> High

Contents
Description

Gene Information Note

Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in the "Target gene [gene] related to VIS" section

Immune Analysis Plot Note

Left: Heatmap of target gene expression and the level of various types of immune cells (cell type fractions) in all samples based on CIBERSORT method.
Right: Correlation of target gene expression and the level of various types of immune cells in virus positive samples (Pearson Correlation Coefficient).

> Dataset: GSE140662