HIV Target gene Detail Information

> CTDNEP1 Gene Search Result

Gene Information

Gene Name	CTDNEP1
Gene ID	23399
Gene Full Name	CTD nuclear envelope phosphatase 1
Gene Alias	NET56; DULLARD; HSA011916
Transcripts	ENSG00000288307
Virus	HIV
Gene Type	protein coding
HPA Location Info	Lipid droplets;
Membrane Info	Predicted membrane proteins
HPA Protein Class Info	Enzymes, Predicted intracellular proteins, Predicted membrane proteins
Uniport_ID	O95476
HGNC ID	HGNC:19085
VEGA ID	OTTHUMG00000102180
OMIM ID	610684
String ID	9606.ENSP00000461749
PharmGKB ID	PA134937999

Target gene [CTDNEP1] related to VISs

DVID	Chromosome	HM	TFBS	CA	Sum of Overlapped Records	Detail
4005856	chr17	25	4		29	View

Relationship between gene expression and immune infiltrating cell level

Data ID	Disease	Sample number	Sample type
GSE17372 (GEO)	AIDS-associated lymphoma	17	AIDS-Related Lymphomas (HIV+)(17)

> Dataset: GSE17372
HeatMap of cell type fractions in all samples	Lollipop of CTDNEP1 expression and immune infiltrating cell level correlation result in HIV+ samples
CTDNEP1 expression: Low -> High

Contents
Description

Gene Information Note

Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in the "Target gene [gene] related to VIS" section

Immune Analysis Plot Note

Left: Heatmap of target gene expression and the level of various types of immune cells (cell type fractions) in all samples based on CIBERSORT method.
Right: Correlation of target gene expression and the level of various types of immune cells in virus positive samples (Pearson Correlation Coefficient).