HIV Target gene Detail Information

> CTCF Gene Search Result

Gene Information

Gene Name	CTCF
Gene ID	10664
Gene Full Name	CCCTC-binding factor
Gene Alias	MRD21
Transcripts	ENSG00000102974
Virus	HIV
Gene Type	protein coding
HPA Location Info	Nucleoplasm;
HPA Protein Class Info	Cancer-related genes, Disease related genes, Predicted intracellular proteins, Transcription factors
Gene Function	Suppressor gene
Uniport_ID	P49711
HGNC ID	HGNC:13723
VEGA ID	OTTHUMG00000137539
OMIM ID	604167
String ID	9606.ENSP00000264010
PharmGKB ID	PA26998

Target gene [CTCF] related to VISs

DVID	Chromosome	HM	TFBS	CA	Sum of Overlapped Records	Detail
4002711	chr16	82	1		83	View
4002776	chr16	63	16	1	80	View
4002785	chr16	42	20	18	80	View
4004303	chr16	36	10		46	View
4004852	chr16	28	10		38	View
4005063	chr16	28	8		36	View
4005697	chr16	26	4		30	View
4007425	chr16	16	3		19	View
4008003	chr16	11	4	2	17	View
4009376	chr16	12			12	View
4009821	chr16	8	2		10	View
4010293	chr16	9			9	View
4010403	chr16	7	2		9	View
4011131	chr16	5	2		7	View
4014816	chr16		2		2	View
4015623	chr16	1			1	View
4016238	chr16				0	View
4300039	chr16	55	24		79	View

Contents
Description

Gene Information Note

Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in the "Target gene [gene] related to VIS" section

Immune Analysis Plot Note

Left: Heatmap of target gene expression and the level of various types of immune cells (cell type fractions) in all samples based on CIBERSORT method.
Right: Correlation of target gene expression and the level of various types of immune cells in virus positive samples (Pearson Correlation Coefficient).