HPV Target gene Detail Information

> CT45A3 Gene Search Result


Gene Information
Gene Name CT45A3
Gene ID 441519
Gene Full Name cancer/testis antigen family 45 member A3
Gene Alias CT45-3; CT45-4; CT45.3; CT45.4; CT45A4
Transcripts ENSG00000269096
Virus HPV
Gene Type protein coding
HPA Location Info Nucleoli;Nucleoplasm;
HPA Protein Class Info Predicted intracellular proteins
Uniport_ID Q8NHU0
HGNC ID HGNC:33268
VEGA ID OTTHUMG00000022489
OMIM ID 300794
PharmGKB ID PA164718201
Target gene [CT45A3] related to VISs
DVID Chromosome HM TFBS CA Sum of Overlapped Records Detail
5004292 chrX 0 View

Relationship between gene expression and immune infiltrating cell level
Data ID Disease Sample number Sample type
GSE140662 (GEO) Condyloma Acuminatum 8 Condyloma acuminata (HPV+)(5), Skin(3)
HNSC (TCGA) Head and Neck squamous cell carcinoma 566 Head and Neck squamous cell carcinoma(HPV-)(483),Head and Neck squamous cell carcinoma(HPV+)(39),Paracancerous(HPV-)(44)

> Dataset: GSE140662

HeatMap of cell type fractions in all samples Lollipop of CT45A3 expression and immune infiltrating cell level correlation result in HPV+ samples
CT45A3 expression: Low -> High

> Dataset: HNSC

HeatMap of cell type fractions in all samples Lollipop of CT45A3 expression and immune infiltrating cell level correlation result in HPV+ samples
CT45A3 expression: Low -> High

Contents
Description

Gene Information Note

  • Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in the "Target gene [gene] related to VIS" section

Immune Analysis Plot Note

  • Left: Heatmap of target gene expression and the level of various types of immune cells (cell type fractions) in all samples based on CIBERSORT method.
  • Right: Correlation of target gene expression and the level of various types of immune cells in virus positive samples (Pearson Correlation Coefficient).