HIV Target gene Detail Information

> CSNK1G3 Gene Search Result

Gene Information

Gene Name	CSNK1G3
Gene ID	1456
Gene Full Name	casein kinase 1 gamma 3
Gene Alias	CSNK1G3L; CKI-gamma 3
Transcripts	ENSG00000151292
Virus	HIV
Gene Type	protein coding
HPA Location Info
HPA Protein Class Info	Enzymes, Predicted intracellular proteins
Uniport_ID	Q9Y6M4
HGNC ID	HGNC:2456
VEGA ID	OTTHUMG00000128923
OMIM ID	604253
String ID	9606.ENSP00000353904
Drugbank ID	BE0003958
PharmGKB ID	PA26956

Target gene [CSNK1G3] related to VISs

DVID	Chromosome	HM	TFBS	CA	Sum of Overlapped Records	Detail
4004309	chr5	43	3		46	View
4013716	chr5	3			3	View
4013819	chr5	1	2		3	View

Relationship between gene expression and immune infiltrating cell level

Data ID	Disease	Sample number	Sample type
GSE17372 (GEO)	AIDS-associated lymphoma	17	AIDS-Related Lymphomas (HIV+)(17)
GSE50834 (GEO)	HIV-infected disease	44	HIV infected (23), HIV/TB co-infected (21)

> Dataset: GSE17372
HeatMap of cell type fractions in all samples	Lollipop of CSNK1G3 expression and immune infiltrating cell level correlation result in HIV+ samples
CSNK1G3 expression: Low -> High

> Dataset: GSE50834
HeatMap of cell type fractions in all samples	Lollipop of CSNK1G3 expression and immune infiltrating cell level correlation result in HIV+ samples
CSNK1G3 expression: Low -> High

Contents
Description

Gene Information Note

Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in the "Target gene [gene] related to VIS" section

Immune Analysis Plot Note

Left: Heatmap of target gene expression and the level of various types of immune cells (cell type fractions) in all samples based on CIBERSORT method.
Right: Correlation of target gene expression and the level of various types of immune cells in virus positive samples (Pearson Correlation Coefficient).