HBV Target gene Detail Information

> CSNK1G1 Gene Search Result

Gene Information

Gene Name	CSNK1G1
Gene ID	53944
Gene Full Name	casein kinase 1 gamma 1
Gene Alias	CK1gamma1
Transcripts	ENSG00000169118
Virus	HBV
Gene Type	protein coding
HPA Location Info	Cytosol;
Membrane Info	Predicted membrane proteins
HPA Protein Class Info	Enzymes, Predicted intracellular proteins, Predicted membrane proteins
Uniport_ID	Q9HCP0
HGNC ID	HGNC:2454
VEGA ID	OTTHUMG00000133019
OMIM ID	606274
String ID	9606.ENSP00000305777
Drugbank ID	BE0004270
Drug (Cytoscape Annotation)	Sunitinib Malate
PharmGKB ID	PA26954

Target gene [CSNK1G1] related to VISs

DVID	Chromosome	HM	TFBS	CA	Sum of Overlapped Records	Detail
1017171	chr15	1			1	View

Relationship between gene expression and immune infiltrating cell level

Data ID	Disease	Sample number	Sample type
LIHC (TCGA)	Liver hepatocellular carcinoma	424	Liver hepatocellular carcinoma HCV (HBV+)(86), Liver hepatocellular carcinoma HCV (HBV-)(19), Liver hepatocellular carcinoma (HBV+)(209), Liver hepatocellular carcinoma (HBV+)(60), Paracancerous HCV (HBV+)(4), Paracancerous (HBV-)(28), Paracancerous (HBV+)(18)

> Dataset: LIHC
HeatMap of cell type fractions in all samples	Lollipop of CSNK1G1 expression and immune infiltrating cell level correlation result in HBV+ samples
CSNK1G1 expression: Low -> High

Contents
Description

Gene Information Note

Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in the "Target gene [gene] related to VIS" section

Immune Analysis Plot Note

Left: Heatmap of target gene expression and the level of various types of immune cells (cell type fractions) in all samples based on CIBERSORT method.
Right: Correlation of target gene expression and the level of various types of immune cells in virus positive samples (Pearson Correlation Coefficient).