HTLV1 Target gene Detail Information

> CSMD1 Gene Search Result

Gene Information

Gene Name	CSMD1
Gene ID	64478
Gene Full Name	CUB and Sushi multiple domains 1
Gene Alias	PPP1R24
Transcripts	ENSG00000183117
Virus	HTLV1
Gene Type	protein coding
HPA Location Info	Vesicles;
Membrane Info	Predicted membrane proteins
HPA Protein Class Info	Predicted membrane proteins
Gene Function	Suppressor gene
HGNC ID	HGNC:14026
VEGA ID	OTTHUMG00000163605
OMIM ID	608397
String ID	9606.ENSP00000430733
PharmGKB ID	PA26947

Target gene [CSMD1] related to VISs

DVID	Chromosome	HM	TFBS	CA	Sum of Overlapped Records	Detail
6001651	chr8	331	23	23	377	View
6008507	chr8	44			44	View
6009439	chr8	32	5		37	View
6012166	chr8	23			23	View
6013017	chr8	19	1		20	View
6017082	chr8	11			11	View
6017607	chr8	10			10	View
6017712	chr8	9	1		10	View
6018088	chr8	3	3	3	9	View
6019743	chr8	1	6		7	View
6020072	chr8	5	2		7	View
6022211	chr8	5			5	View
6024365	chr8	2	1		3	View
6025049	chr8	2		1	3	View
6027173	chr8			2	2	View
6028231	chr8			1	1	View
6031312	chr8				0	View
6031572	chr8				0	View
6032041	chr8				0	View
6032271	chr8				0	View
6032540	chr8				0	View
6032541	chr8				0	View
6033082	chr8				0	View
6033221	chr8				0	View
6033565	chr8				0	View

Contents
Description

Gene Information Note

Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in the "Target gene [gene] related to VIS" section

Immune Analysis Plot Note

Left: Heatmap of target gene expression and the level of various types of immune cells (cell type fractions) in all samples based on CIBERSORT method.
Right: Correlation of target gene expression and the level of various types of immune cells in virus positive samples (Pearson Correlation Coefficient).