HPV Target gene Detail Information

> CSMD1 Gene Search Result

Gene Information

Gene Name	CSMD1
Gene ID	64478
Gene Full Name	CUB and Sushi multiple domains 1
Gene Alias	PPP1R24
Transcripts	ENSG00000183117
Virus	HPV
Gene Type	protein coding
HPA Location Info	Vesicles;
Membrane Info	Predicted membrane proteins
HPA Protein Class Info	Predicted membrane proteins
Gene Function	Suppressor gene
HGNC ID	HGNC:14026
VEGA ID	OTTHUMG00000163605
OMIM ID	608397
String ID	9606.ENSP00000430733
PharmGKB ID	PA26947

Target gene [CSMD1] related to VISs

DVID	Chromosome	HM	TFBS	CA	Sum of Overlapped Records	Detail
5001506	chr8	26	5		31	View
5201185	chr8		2		2	View
5300040	chr8				0	View
5300041	chr8	4			4	View
5300042	chr8	2	1		3	View
5400451	chr8	39	16	67	122	View
5401162	chr8	17	2		19	View
5402946	chr8	57	19	2	78	View
5402968	chr8	72	7	4	83	View
5402969	chr8	55	19	1	75	View
5404143	chr8	56	25	1	82	View
5404587	chr8	9	1		10	View
5404793	chr8				0	View

Contents
Description

Gene Information Note

Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in the "Target gene [gene] related to VIS" section

Immune Analysis Plot Note

Left: Heatmap of target gene expression and the level of various types of immune cells (cell type fractions) in all samples based on CIBERSORT method.
Right: Correlation of target gene expression and the level of various types of immune cells in virus positive samples (Pearson Correlation Coefficient).