HIV Target gene Detail Information

> CSGALNACT2 Gene Search Result


Gene Information
Gene Name CSGALNACT2
Gene ID 55454
Gene Full Name chondroitin sulfate N-acetylgalactosaminyltransferase 2
Gene Alias CHGN2; ChGn-2; PRO0082; GALNACT2; GALNACT-2; beta4GalNAcT
Transcripts ENSG00000169826
Virus HIV
Gene Type protein coding
HPA Location Info Endoplasmic reticulum;
HPA Protein Class Info Enzymes, Predicted intracellular proteins
Uniport_ID Q8N6G5
HGNC ID HGNC:24292
VEGA ID OTTHUMG00000018023
OMIM ID 616616
String ID 9606.ENSP00000363590
PharmGKB ID PA162382854
Target gene [CSGALNACT2] related to VISs
DVID Chromosome HM TFBS CA Sum of Overlapped Records Detail
4001666 chr10 105 11 26 142 View

Contents
Description

Gene Information Note

  • Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in the "Target gene [gene] related to VIS" section

Immune Analysis Plot Note

  • Left: Heatmap of target gene expression and the level of various types of immune cells (cell type fractions) in all samples based on CIBERSORT method.
  • Right: Correlation of target gene expression and the level of various types of immune cells in virus positive samples (Pearson Correlation Coefficient).