HTLV1 Target gene Detail Information

> CSGALNACT1 Gene Search Result


Gene Information
Gene Name CSGALNACT1
Gene ID 55790
Gene Full Name chondroitin sulfate N-acetylgalactosaminyltransferase 1
Gene Alias ChGn; ChGn-1; CSGalNAcT-1; beta4GalNAcT
Transcripts ENSG00000147408
Virus HTLV1
Gene Type protein coding
HPA Location Info Cytosol;Golgi apparatus;
HPA Protein Class Info Enzymes, Predicted intracellular proteins
Uniport_ID Q8TDX6
HGNC ID HGNC:24290
VEGA ID OTTHUMG00000130827
OMIM ID 616615
String ID 9606.ENSP00000411816
PharmGKB ID PA162382829
Target gene [CSGALNACT1] related to VISs
DVID Chromosome HM TFBS CA Sum of Overlapped Records Detail
6004169 chr8 60 6 60 126 View
6016493 chr8 10 2 12 View
6021492 chr8 1 5 6 View
6027734 chr8 1 1 2 View

Contents
Description

Gene Information Note

  • Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in the "Target gene [gene] related to VIS" section

Immune Analysis Plot Note

  • Left: Heatmap of target gene expression and the level of various types of immune cells (cell type fractions) in all samples based on CIBERSORT method.
  • Right: Correlation of target gene expression and the level of various types of immune cells in virus positive samples (Pearson Correlation Coefficient).