HBV Target gene Detail Information

> CSGALNACT1 Gene Search Result

Gene Information

Gene Name	CSGALNACT1
Gene ID	55790
Gene Full Name	chondroitin sulfate N-acetylgalactosaminyltransferase 1
Gene Alias	ChGn; ChGn-1; CSGalNAcT-1; beta4GalNAcT
Transcripts	ENSG00000147408
Virus	HBV
Gene Type	protein coding
HPA Location Info	Cytosol;Golgi apparatus;
HPA Protein Class Info	Enzymes, Predicted intracellular proteins
Uniport_ID	Q8TDX6
HGNC ID	HGNC:24290
VEGA ID	OTTHUMG00000130827
OMIM ID	616615
String ID	9606.ENSP00000411816
PharmGKB ID	PA162382829

Target gene [CSGALNACT1] related to VISs

DVID	Chromosome	HM	TFBS	CA	Sum of Overlapped Records	Detail
1005534	chr8	39	5	8	52	View

Relationship between gene expression and immune infiltrating cell level

Data ID	Disease	Sample number	Sample type
LIHC (TCGA)	Liver hepatocellular carcinoma	424	Liver hepatocellular carcinoma HCV (HBV+)(86), Liver hepatocellular carcinoma HCV (HBV-)(19), Liver hepatocellular carcinoma (HBV+)(209), Liver hepatocellular carcinoma (HBV+)(60), Paracancerous HCV (HBV+)(4), Paracancerous (HBV-)(28), Paracancerous (HBV+)(18)

> Dataset: LIHC
HeatMap of cell type fractions in all samples	Lollipop of CSGALNACT1 expression and immune infiltrating cell level correlation result in HBV+ samples
CSGALNACT1 expression: Low -> High

Contents
Description

Gene Information Note

Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in the "Target gene [gene] related to VIS" section

Immune Analysis Plot Note

Left: Heatmap of target gene expression and the level of various types of immune cells (cell type fractions) in all samples based on CIBERSORT method.
Right: Correlation of target gene expression and the level of various types of immune cells in virus positive samples (Pearson Correlation Coefficient).