HIV Target gene Detail Information

> CREG1 Gene Search Result

Gene Information

Gene Name	CREG1
Gene ID	8804
Gene Full Name	cellular repressor of E1A stimulated genes 1
Gene Alias	CREG
Transcripts	ENSG00000143162
Virus	HIV
Gene Type	protein coding
HPA Location Info	Microtubules;Vesicles;Predicted to be secreted;
HPA Protein Class Info	Predicted secreted proteins
Uniport_ID	O75629
HGNC ID	HGNC:2351
VEGA ID	OTTHUMG00000034682
OMIM ID	618055
String ID	9606.ENSP00000359540
PharmGKB ID	PA26869

Target gene [CREG1] related to VISs

DVID	Chromosome	HM	TFBS	CA	Sum of Overlapped Records	Detail
4002105	chr1	37	73	2	112	View

Relationship between gene expression and immune infiltrating cell level

Data ID	Disease	Sample number	Sample type
GSE17372 (GEO)	AIDS-associated lymphoma	17	AIDS-Related Lymphomas (HIV+)(17)
GSE50834 (GEO)	HIV-infected disease	44	HIV infected (23), HIV/TB co-infected (21)

> Dataset: GSE17372
HeatMap of cell type fractions in all samples	Lollipop of CREG1 expression and immune infiltrating cell level correlation result in HIV+ samples
CREG1 expression: Low -> High

> Dataset: GSE50834
HeatMap of cell type fractions in all samples	Lollipop of CREG1 expression and immune infiltrating cell level correlation result in HIV+ samples
CREG1 expression: Low -> High

Contents
Description

Gene Information Note

Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in the "Target gene [gene] related to VIS" section

Immune Analysis Plot Note

Left: Heatmap of target gene expression and the level of various types of immune cells (cell type fractions) in all samples based on CIBERSORT method.
Right: Correlation of target gene expression and the level of various types of immune cells in virus positive samples (Pearson Correlation Coefficient).